RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 GPHB5Q86YW7 130 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 OR2C3Q8N628 320 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 OR5B3Q8NH48 314 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 KIR2DL5BQ8NHK3 375 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 PTX4Q96A99 478 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 NEDD4LQ96PU5 975 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 MFFQ9GZY8 342 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 OR2D2Q9H210 308 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 AP4S1Q9Y587 144 aa7.12□□□□□ -1.27
GPNMB-211ENST00000479625 TRBV5-7A0A0A0MS05 114 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 A0A0A6YYD4 124 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 HMX3A6NHT5 357 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 M0R2N4 97 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 EI24O14681 340 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 OGG1O15527 345 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 ALPLP05186 524 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF585BQ52M93 769 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 PGLYRP3Q96LB9 341 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 RARRES2Q99969 163 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 C11orf68Q9H3H3 251 aaKnown RBP7.11□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF430Q9H8G1 570 aaPredicted RBP7.11□□□□□ -1.27
GPNMB-211ENST00000479625 MAP6D1Q9H9H5 199 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 SDHAF2Q9NX18 166 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 RDH8Q9NYR8 311 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 AK3Q9UIJ7 227 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 FBXL7Q9UJT9 491 aa7.11□□□□□ -1.27
GPNMB-211ENST00000479625 IGHV3-35A0A0C4DH35 117 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 PNMA8CA0A1B0GUJ8 204 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 MFSD2BA6NFX1 497 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 CRYZL1O95825 349 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 CD3GP09693 182 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 MFAP2P55001 183 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 TCTAP57738 103 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 UBE2KP61086 200 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 RPS27AP62979 156 aaKnown RBP7.1□□□□□ -1.27
GPNMB-211ENST00000479625 UNC119Q13432 240 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 SMN1Q16637 294 aaKnown RBP7.1□□□□□ -1.27
GPNMB-211ENST00000479625 VMA21Q3ZAQ7 101 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 FAM209BQ5JX69 171 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 APRG1Q8IVJ8 170 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 SLC38A6Q8IZM9 456 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 TTC9CQ8N5M4 171 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 APH1BQ8WW43 257 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 SLC7A6OSQ96CW6 309 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-211ENST00000479625 CENPNQ96H22 339 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-211ENST00000479625 SPAG8Q99932 426 aaPredicted RBP7.1□□□□□ -1.27
GPNMB-211ENST00000479625 DNAH5Q8TE73 4624 aa7.1□□□□□ -1.27
GPNMB-211ENST00000479625 TRAV25A0A0B4J276 109 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 TEX22C9J3V5 150 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-211ENST00000479625 C8orf88P0DMB2 117 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 FCGR1AP12314 374 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 CBX3Q13185 183 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 RTL8BQ17RB0 113 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 FAM106AQ4KMX7 169 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 YIF1BQ5BJH7 314 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 OR4A47Q6IF82 309 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 CDH26Q8IXH8 852 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 TEX45Q8NA69 505 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-211ENST00000479625 CCDC197Q8NCU1 140 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 OR11H2Q8NH07 326 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 CD300LFQ8TDQ1 290 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 GGHQ92820 318 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 DERL3Q96Q80 235 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 SPIN2AQ99865 258 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 SPIN2BQ9BPZ2 258 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 TMEM59Q9BXS4 323 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 Q9N2K0 584 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 FGF20Q9NP95 211 aaPredicted RBP7.09□□□□□ -1.27
GPNMB-211ENST00000479625 MRPS18AQ9NVS2 196 aaKnown RBP7.09□□□□□ -1.27
GPNMB-211ENST00000479625 CLEC2DQ9UHP7 191 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 ZNF257Q9Y2Q1 563 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 ORC6Q9Y5N6 252 aa7.09□□□□□ -1.27
GPNMB-211ENST00000479625 IGHV4-4A0A075B6R2 117 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 TRBV6-6A0A0A6YYG2 114 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 A0A1B0GW64 132 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 LINC00473A8K010 186 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 E7EUB6 86 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 SOCS1O15524 211 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 ACTL6BO94805 426 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 GPR183P32249 361 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 MAP2K4P45985 399 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 MED21Q13503 144 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 MED22Q15528 200 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 TMPRSS11AQ6ZMR5 421 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 ZNF645Q8N7E2 425 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 NKAIN3Q8N8D7 197 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 MAPKAPK5-AS1Q8N8E1 139 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 RHOXF1Q8NHV9 184 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 GALNT14Q96FL9 552 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 Q96MT0 163 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 SLC29A1Q99808 456 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 UQCC2Q9BRT2 126 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 TM2D1Q9BX74 207 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 PLEKHJ1Q9NW61 149 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 BABAM2Q9NXR7 383 aa7.08□□□□□ -1.28
GPNMB-211ENST00000479625 MPTX1A8MV57 137 aa7.07□□□□□ -1.28
GPNMB-211ENST00000479625 TSPAN4O14817 238 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms