RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 OR52E6Q96RD3 313 aa2.52□□□□□ -2.01
UPF3B-203ENST00000478840 AICDAQ9GZX7 198 aa2.52□□□□□ -2.01
UPF3B-203ENST00000478840 GPR84Q9NQS5 396 aa2.52□□□□□ -2.01
UPF3B-203ENST00000478840 TXNL4BQ9NX01 149 aaKnown RBP2.52□□□□□ -2.01
UPF3B-203ENST00000478840 ATG2BQ96BY7 2078 aa2.52□□□□□ -2.01
UPF3B-203ENST00000478840 ZFYVE9O95405 1425 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 NOTCH2Q04721 2471 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 IGKV3D-11A0A0A0MRZ8 115 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 H3BPC8 53 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 LST1O00453 97 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 UBE2L6O14933 153 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 TRAPPC3O43617 180 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 CHP2O43745 196 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 GZMBP10144 247 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 GABRA2P47869 451 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 CDK9P50750 372 aaKnown RBP2.51□□□□□ -2.01
UPF3B-203ENST00000478840 FABP9Q0Z7S8 132 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 ACOT6Q3I5F7 207 aaPredicted RBP2.51□□□□□ -2.01
UPF3B-203ENST00000478840 AKIRIN2Q53H80 203 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 RPS4Y2Q8TD47 263 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 SMCR5Q8TEV8 140 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 ANKRD7Q92527 254 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 PECRQ9BY49 303 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 PSORS1C2Q9UIG4 136 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 REREQ9P2R6 1566 aa2.51□□□□□ -2.01
UPF3B-203ENST00000478840 TMEM235A6NFC5 223 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 E7EQL1 145 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 INMT-MINDY4F8WBC2 141 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 ATP5HO75947 161 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 IFNA6P05013 189 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CD79AP11912 226 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CPMP14384 443 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CD24P25063 80 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 FUSP35637 526 aaKnown RBP eCLIP2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CD200P41217 278 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 RPL27AP46776 148 aaKnown RBP2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CAV1Q03135 178 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 TNFRSF9Q07011 255 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 TNFAIP8L3Q5GJ75 292 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 SMARCD3Q6STE5 483 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 OR51D1Q8NGF3 324 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 C20orf166-AS1Q96NR2 134 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 ZNF471Q9BX82 626 aaPredicted RBP2.5□□□□□ -2.01
UPF3B-203ENST00000478840 PSTPIP2Q9H939 334 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 CXorf21Q9HAI6 301 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 ANGPT4Q9Y264 503 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 GRIN2BQ13224 1484 aa2.5□□□□□ -2.01
UPF3B-203ENST00000478840 FLT4P35916 1363 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 A8MUN3 132 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 ODF3BA8MYP8 253 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 NPYP01303 97 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 FGF6P10767 208 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 XCL1P47992 114 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 TAS2R30P59541 319 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 REEP5Q00765 189 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 C2orf91Q6ZV80 131 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 OR4C16Q8NGL9 310 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 ROPN1LQ96C74 230 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 CNBD2Q96M20 576 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 PRELID1Q9Y255 219 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 FAM215AQ9Y5M1 114 aa2.49□□□□□ -2.01
UPF3B-203ENST00000478840 DHX57Q6P158 1386 aaKnown RBP2.49□□□□□ -2.01
UPF3B-203ENST00000478840 PQLC2LA1A4F0 135 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 SMIM9A6NGZ8 99 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 ZNF73O43830 326 aaPredicted RBP2.48□□□□□ -2.01
UPF3B-203ENST00000478840 FADS1O60427 444 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 GABRA4P48169 554 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 POLR2GP62487 172 aaKnown RBP eCLIP2.48□□□□□ -2.01
UPF3B-203ENST00000478840 OR5C1Q8NGR4 320 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 TLNRD1Q9H1K6 362 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 MINOS1-NBL1R4GNA1 71 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 NCOA1Q15788 1441 aa2.48□□□□□ -2.01
UPF3B-203ENST00000478840 A0A0J9YX75 114 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 BHLHE40O14503 412 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 PLA2G10O15496 165 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 IGKV4-1P06312 121 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 HIST1H1TP22492 207 aaPredicted RBP2.47□□□□□ -2.01
UPF3B-203ENST00000478840 BLVRBP30043 206 aaPredicted RBP2.47□□□□□ -2.01
UPF3B-203ENST00000478840 GZMMP51124 257 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 OR4D2P58180 307 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 TAS2R20P59543 309 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 PSME3P61289 254 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 GNA12Q03113 381 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 EDDM3AQ14507 147 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 GLT6D1Q7Z4J2 308 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 OR2T4Q8NH00 348 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 NMNAT3Q96T66 252 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 MIEN1Q9BRT3 115 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 ADGRL3Q9HAR2 1447 aa2.47□□□□□ -2.01
UPF3B-203ENST00000478840 TRPM6Q9BX84 2022 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 PSMD12O00232 456 aaPredicted RBP2.46□□□□□ -2.02
UPF3B-203ENST00000478840 HAND1O96004 215 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 BRD3OSQ6XYD6 125 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 C20orf196Q8IYI0 205 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 PACRGLQ8N7B6 248 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 OR5B17Q8NGF7 314 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 OR13C8Q8NGS7 320 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 FAM96AQ9H5X1 160 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 TUBA4BQ9H853 241 aa2.46□□□□□ -2.02
UPF3B-203ENST00000478840 XAGE1AQ9HD64 81 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms