RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 ITLN2Q8WWU7 325 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 MARC2Q969Z3 335 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 PINX1Q96BK5 328 aaKnown RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 R3HDM4Q96D70 268 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 C5orf30Q96GV9 206 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 CLCC1Q96S66 551 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 ATP5SQ99766 215 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 ZNF251Q9BRH9 671 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 PSMG3Q9BT73 122 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 DCTN5Q9BTE1 182 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 GGACTQ9BVM4 153 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 SMDT1Q9H4I9 107 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 GSX1Q9H4S2 264 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 CHODLQ9H9P2 273 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 MMP26Q9NRE1 261 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 FKBP11Q9NYL4 201 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 ZNF257Q9Y2Q1 563 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 FLNCQ14315 2725 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 HIVEP3Q5T1R4 2406 aa5.48□□□□□ -1.53
LDB3-206ENST00000477489 DIDO1Q9BTC0 2240 aaKnown RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 USP9YO00507 2555 aaPredicted RBP5.48□□□□□ -1.53
LDB3-206ENST00000477489 IGHV3-43A0A0B4J1X8 118 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 A0A0G2JRQ6 117 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 TMEM238LA0A1B0GVL6 79 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 IGSF23A1L1A6 192 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 LINC00473A8K010 186 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 DVL1O14640 695 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 SHOXO15266 292 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 RAMP3O60896 148 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 S1PR2O95136 353 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 KRASP01116 189 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 IFNA5P01569 189 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 APOA2P02652 100 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 DANCRP0C864 163 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 IGHV3-43DP0DP04 118 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 OMGP23515 440 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 MC5RP33032 325 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 RAB13P51153 203 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 ZNF134P52741 427 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 PAX9P55771 341 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 DLX6P56179 175 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 BRWD1-AS2P59051 145 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 SPCS3P61009 180 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 SERF2P84101 59 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 TMEM200BQ69YZ2 307 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 Q6ZRM9 215 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 PDPNQ86YL7 162 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 ODF3L1Q8IXM7 274 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 LYG1Q8N1E2 194 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 OR8B3Q8NGG8 313 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 OR4A5Q8NH83 315 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 VSTM2AQ8TAG5 236 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 UBALD1Q8TB05 177 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 TMED6Q8WW62 240 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 NEUROG1Q92886 237 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 NEIL1Q96FI4 390 aaPredicted RBP5.47□□□□□ -1.53
LDB3-206ENST00000477489 OR8B2Q96RD0 313 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 REG4Q9BYZ8 158 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 C19orf12Q9NSK7 152 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 PSENENQ9NZ42 101 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 TIMM9Q9Y5J7 89 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 KLF2Q9Y5W3 355 aaPredicted RBP5.47□□□□□ -1.53
LDB3-206ENST00000477489 ARID1AO14497 2285 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 LRRK2Q5S007 2527 aa5.47□□□□□ -1.53
LDB3-206ENST00000477489 PKDREJQ9NTG1 2253 aa5.46□□□□□ -1.53
LDB3-206ENST00000477489 UTP20O75691 2785 aaKnown RBP5.46□□□□□ -1.53
LDB3-206ENST00000477489 ROS1P08922 2347 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 A0A1B0GW64 132 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 FAM24AA6NFZ4 105 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 ZNF705EA8MWA4 302 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 FNDC10F2Z333 226 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 INS-IGF2F8WCM5 200 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 I3L521 148 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 FCGR3BO75015 233 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 PROP1O75360 226 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 NDUFS6O75380 124 aaKnown RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 TSPAN9O75954 239 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 TMEM50AO95807 157 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 PLAUP00749 431 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 TFF1P04155 84 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 IL6RP08887 468 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 SELLP14151 372 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 G6PCP35575 357 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 PRRX1P54821 245 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 RAB2AP61019 212 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 GNB2P62879 340 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 HOXA4Q00056 320 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 ZNF816Q0VGE8 651 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 PJVKQ0ZLH3 352 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 ZNF273Q14593 569 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 TOR2AQ5JU69 321 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 PRAMEF5Q5TYX0 476 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 NCR3LG1Q68D85 454 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 C1orf122Q6ZSJ8 110 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 CENPVQ7Z7K6 275 aaPredicted RBP5.46□□□□□ -1.54
LDB3-206ENST00000477489 CCDC28AQ8IWP9 274 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 KIR3DL3Q8N743 410 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 BEND2Q8NDZ0 799 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 OR5AN1Q8NGI8 311 aa5.46□□□□□ -1.54
LDB3-206ENST00000477489 OR5C1Q8NGR4 320 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms