RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 TINCRA0A1B0GVN0 87 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 LINC00587B1AMM8 73 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 DISC1C4P0D8 188 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 ARPC5O15511 151 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 LY6HO94772 140 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 KRT75O95678 551 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 CST2P09228 141 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 LINC00614P0C842 121 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 GZMBP10144 247 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 HIST1H1EP10412 219 aaKnown RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 CYBAP13498 195 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 SLC25A16P16260 332 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 ORM2P19652 201 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 MAGEA12P43365 314 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 SLCO1A2P46721 670 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 PSMB3P49720 205 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 AP2S1P53680 142 aaPredicted RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 RPL19P84098 196 aaKnown RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 GTF2BQ00403 316 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 OR2F1Q13607 317 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 SMCO1Q147U7 214 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 POU6F1Q14863 301 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 C4orf26Q17RF5 130 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 OGFRL1Q5TC84 451 aaPredicted RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 XKRXQ6PP77 449 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 RASL11AQ6T310 242 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 C5orf46Q6UWT4 87 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 C3orf62Q6ZUJ4 267 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 SLC36A1Q7Z2H8 476 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 TMED4Q7Z7H5 227 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 LRRC25Q8N386 305 aaPredicted RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 CLDN22Q8N7P3 220 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 ZNF676Q8N7Q3 588 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 OR11H1Q8NG94 326 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 RAB8BQ92930 207 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 BORCS5Q969J3 196 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 KCTD7Q96MP8 289 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM56Q96MV1 263 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 MED18Q9BUE0 208 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 BOLA2Q9H3K6 86 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 C16orf95Q9H693 158 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.12□□□□□ -2.23
TARDBP-208ENST00000477447 FGFR1OP2Q9NVK5 253 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 TP53TG1Q9Y2A0 90 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM56-RWDD3S4R434 201 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 PTPRGP23470 1445 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 MPDZO75970 2070 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 ZNF532Q9HCE3 1301 aa1.12□□□□□ -2.23
TARDBP-208ENST00000477447 TRPM6Q9BX84 2022 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ARHGEF10O15013 1369 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 PBRM1Q86U86 1689 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 A0A0G2JQZ4 141 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 SMIM9A6NGZ8 99 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 OR11H12B2RN74 326 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 M0QZK8 103 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 KCNK1O00180 336 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 PSMD12O00232 456 aaPredicted RBP1.11□□□□□ -2.23
TARDBP-208ENST00000477447 PHYHO14832 338 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 CNIH1O95406 144 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 CRYZL1O95825 349 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 IFNA21P01568 189 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 TYMSP04818 313 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 SCGB1A1P11684 91 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 UGT2B7P16662 529 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ALOX5APP20292 161 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 DLX6P56179 175 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 RAB8AP61006 207 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 LRRC75BQ2VPJ9 315 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 KRTAP21-3Q3LHN1 58 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 TRIQKQ629K1 86 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 LGALS9CQ6DKI2 356 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 GLT6D1Q7Z4J2 308 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 DHFR2Q86XF0 187 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM75Q8N9X5 138 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 TMEM161BQ8NDZ6 487 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ATP6V1C2Q8NEY4 427 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 OR13D1Q8NGV5 346 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 OR11H2Q8NH07 326 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 OR4X1Q8NH49 305 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 MAFIPQ8WZ33 124 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 UPK3BQ9BT76 320 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 UGT2B28Q9BY64 529 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 MRPS26Q9BYN8 205 aaKnown RBP1.11□□□□□ -2.23
TARDBP-208ENST00000477447 MIXL1Q9H2W2 232 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 MAP1LC3AQ9H492 121 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 SPANXB1Q9NS25 103 aaPredicted RBP1.11□□□□□ -2.23
TARDBP-208ENST00000477447 PARVAQ9NVD7 372 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ARMC1Q9NVT9 282 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 GLTPQ9NZD2 209 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 LINC00527Q9UJ94 153 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 DNAJC12Q9UKB3 198 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 OR52A1Q9UKL2 312 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 HHLA2Q9UM44 414 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ARL2BPQ9Y2Y0 163 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC144AA2RUR9 1427 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 CNTLNQ9NXG0 1405 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 CCDC171Q6TFL3 1326 aa1.11□□□□□ -2.23
TARDBP-208ENST00000477447 ZNF638Q14966 1978 aaKnown RBP1.1□□□□□ -2.23
TARDBP-208ENST00000477447 SLIT2O94813 1529 aa1.1□□□□□ -2.23
TARDBP-208ENST00000477447 CCNB3Q8WWL7 1395 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms