RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 H2AFB1P0C5Y9 115 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 SPCS3P61009 180 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 AARDQ4LEZ3 155 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 OR10P1Q8NGE3 313 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 RAB39BQ96DA2 213 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 CLCC1Q96S66 551 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 TMEM204Q9BSN7 226 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 ZNRD1Q9P1U0 126 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 CHD8Q9HCK8 2581 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 UBE2L5PA0A1B0GUS4 154 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 LYNX1G3V0Z9 82 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 GPR37O15354 613 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 PPIHO43447 177 aaKnown RBP12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 LYNX1P0DP58 116 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 RELBQ01201 579 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 TLE4Q04727 773 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 GUCA2BQ16661 112 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 ATP6V1FQ16864 119 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 DPPA3Q6W0C5 159 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 RHOVQ96L33 236 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 AIFM2Q9BRQ8 373 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 PBDC1Q9BVG4 233 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 PARD6GQ9BYG4 376 aaPredicted RBP12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 WDR61Q9GZS3 305 aaKnown RBP12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 DOCK11Q5JSL3 2073 aa12.6□□□□□ -0.39
RPUSD3-215ENST00000475470 C9JQL5 133 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 OR8U8P0C7N1 319 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 COL8A2P25067 703 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 LOXP28300 417 aaPredicted RBP12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 TFF3Q07654 80 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 TMEM88Q6PEY1 159 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 OR52E5Q8NH55 327 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 PSMG3Q9BT73 122 aaPredicted RBP12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 COL6A6A6NMZ7 2263 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 TRAV3A0A0B4J244 114 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 LY86O95711 162 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 HRASP01112 189 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 CT45A6P0DMU7 189 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 CT45A5P0DMU8 189 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 CT45A7P0DMV0 189 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 RPS16P62249 146 aaKnown RBP12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 PUSL1Q8N0Z8 303 aaKnown RBP12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 CLRN3Q8NCR9 226 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 NBASA2RRP1 2371 aa12.59□□□□□ -0.39
RPUSD3-215ENST00000475470 PMS2P5A8MQ11 134 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 F12P00748 615 aaPredicted RBP12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 PPOXP50336 477 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 PPT1P50897 306 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 RTL8BQ17RB0 113 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 TAF15Q92804 592 aaKnown RBP eCLIP12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 TMEM147Q9BVK8 224 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 HIPK2Q9H2X6 1198 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 SLC35D1Q9NTN3 355 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 BTBD17A6NE02 478 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 FAM157AC9JC47 383 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 RPP30P78346 268 aaKnown RBP12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 OR4A47Q6IF82 309 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 SFT2D1Q8WV19 159 aa12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 HEYLQ9NQ87 328 aaPredicted RBP12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 ANKHD1Q8IWZ3 2542 aaKnown RBP12.58□□□□□ -0.4
RPUSD3-215ENST00000475470 RAB2AP61019 212 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 GNB2P62879 340 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 CCL20P78556 96 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 SERF2P84101 59 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 SPSB3Q6PJ21 355 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 ZNF833PQ6ZTB9 187 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 ZNF429Q86V71 674 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 SCRT1Q9BWW7 348 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 RELNP78509 3460 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 SNAPINO95295 136 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 IFNA10P01566 189 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 TMEM155Q4W5P6 130 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 PDLIM3Q53GG5 364 aaPredicted RBP12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 DHRS7BQ6IAN0 325 aaPredicted RBP12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 OR10X1Q8NGY0 326 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 RAB1BQ9H0U4 201 aa12.57□□□□□ -0.4
RPUSD3-215ENST00000475470 C15orf61A6NNL5 157 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 C15orf62A8K5M9 175 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 SCAF4O95104 1147 aaKnown RBP12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 HBE1P02100 147 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 RBMXL1Q96E39 390 aaKnown RBP12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 RPRMQ9NS64 109 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 RALYQ9UKM9 306 aaKnown RBP12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 IGKV1-16P04430 117 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 HOXA1P49639 335 aaPredicted RBP12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 DLX6P56179 175 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 CBLN2Q8IUK8 224 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 CBLN4Q9NTU7 201 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 TCF19Q9Y242 345 aa12.56□□□□□ -0.4
RPUSD3-215ENST00000475470 TRBV23-1A0A0A0MS06 115 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 A0A1B0GW64 132 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 J3QR06 171 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 ARG1P05089 322 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 VDAC2P45880 294 aaPredicted RBP12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 HNF4GQ14541 408 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
RPUSD3-215ENST00000475470 MRPL20Q9BYC9 149 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms