RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 UBE2KP61086 200 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 VMA21Q3ZAQ7 101 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 C3orf56Q8N813 242 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 POC5Q8NA72 575 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 ZFAND1Q8TCF1 268 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 CCDC32Q9BV29 185 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 ZNF747Q9BV97 191 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 ANK2Q01484 3957 aa12.44□□□□□ -0.42
COL1A1-204ENST00000474644 FCN1O00602 326 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 S1PR2O95136 353 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 CA2P00918 260 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 F2RP25116 425 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 NDPQ00604 133 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 FOXRED2Q8IWF2 684 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 VKORC1L1Q8N0U8 176 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 CD300LFQ8TDQ1 290 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 WIPF2Q8TF74 440 aaPredicted RBP12.43□□□□□ -0.42
COL1A1-204ENST00000474644 CLCC1Q96S66 551 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 WDR12Q9GZL7 423 aaKnown RBP12.43□□□□□ -0.42
COL1A1-204ENST00000474644 C5orf66Q9H5L9 145 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 GPR132Q9UNW8 380 aa12.43□□□□□ -0.42
COL1A1-204ENST00000474644 C14orf166Q9Y224 244 aaKnown RBP12.43□□□□□ -0.42
COL1A1-204ENST00000474644 LINC00854A0A1B0GVQ3 168 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 AP4M1O00189 453 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 MPPED1O15442 326 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 HPRT1P00492 218 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 CD40LGP29965 261 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 ZNF846Q147U1 533 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 PPP1R27Q86WC6 154 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 TCTEX1D1Q8N7M0 179 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 CCDC71LQ8N9Z2 235 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 NOL4LQ96MY1 436 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-204ENST00000474644 RTBDNQ9BSG5 229 aaPredicted RBP12.42□□□□□ -0.42
COL1A1-204ENST00000474644 OR51J1Q9H342 316 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 PLEKHA2Q9HB19 425 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 PARP11Q9NR21 331 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 COMMD9Q9P000 198 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 COPZ2Q9P299 210 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 LINC00527Q9UJ94 153 aa12.42□□□□□ -0.42
COL1A1-204ENST00000474644 ATP6V0E1O15342 81 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 HRASP01112 189 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 IGF1P05019 195 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 LPAR6P43657 344 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 TAS2R31P59538 309 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 CX3CL1P78423 397 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 SSBP2P81877 361 aaPredicted RBP12.41□□□□□ -0.42
COL1A1-204ENST00000474644 SRSF4Q08170 494 aaKnown RBP12.41□□□□□ -0.42
COL1A1-204ENST00000474644 PJVKQ0ZLH3 352 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 MRGPRG-AS1Q2M3A8 158 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 ZNF585BQ52M93 769 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 PUSL1Q8N0Z8 303 aaKnown RBP12.41□□□□□ -0.42
COL1A1-204ENST00000474644 STPG2Q8N412 459 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 TEX45Q8NA69 505 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 RHOVQ96L33 236 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 VSIG4Q9Y279 399 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 FBXO7Q9Y3I1 522 aa12.41□□□□□ -0.42
COL1A1-204ENST00000474644 NAP1L6A6NFF2 107 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 H0Y980 276 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 KBTBD11O94819 623 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 NQO2P16083 231 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 GNB1P62873 340 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 POU2AF1Q16633 256 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 PRSS8Q16651 343 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 SSX9Q7RTT3 188 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 VSTM2AQ8TAG5 236 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 CHPT1Q8WUD6 406 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 R3HDM4Q96D70 268 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 TP53RKQ96S44 253 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 CITED1Q99966 193 aa12.4□□□□□ -0.42
COL1A1-204ENST00000474644 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
COL1A1-204ENST00000474644 FAM212BQ9NTI7 297 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-204ENST00000474644 C3orf85A0A1B0GTC6 90 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 MARCH11A6NNE9 402 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 ARPC1BO15143 372 aaKnown RBP12.39□□□□□ -0.43
COL1A1-204ENST00000474644 OR2A4O95047 310 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 BTCP35070 178 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 CCR6P51684 374 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 OR4A47Q6IF82 309 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 SHISA2Q6UWI4 295 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 ZNF562Q6V9R5 426 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 ADAD2Q8NCV1 583 aaKnown RBP12.39□□□□□ -0.43
COL1A1-204ENST00000474644 TMEM167AQ8TBQ9 72 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 ARPC1AQ92747 370 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 TMEM230Q96A57 120 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 SCGB3A2Q96PL1 93 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 OR2A7Q96R45 310 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 SLC25A21Q9BQT8 299 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-204ENST00000474644 AIFM2Q9BRQ8 373 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 NAA60Q9H7X0 242 aa12.39□□□□□ -0.43
COL1A1-204ENST00000474644 ZNF430Q9H8G1 570 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-204ENST00000474644 PSMB11A5LHX3 300 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CRYM-AS1A6NIL9 109 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CENPXA8MT69 81 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 PLA2G10O15496 165 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 CREBL2O60519 120 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-204ENST00000474644 IGKV1-39P01597 117 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 IGKV1D-39P04432 117 aa12.38□□□□□ -0.43
COL1A1-204ENST00000474644 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms