RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 F2RP25116 425 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 PMS2P11Q13670 270 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 ACP7Q6ZNF0 438 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 ZNF383Q8NA42 475 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 CCL17Q92583 94 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 FAM210BQ96KR6 192 aa17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 PARD6GQ9BYG4 376 aaPredicted RBP17.24■□□□□ 0.35
SMIM11A-204ENST00000474455 IGKV1D-13A0A0B4J2D9 117 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 IGKV1-13P0DP09 117 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 BCL2P10415 239 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 HIST1H1BP16401 226 aaKnown RBP17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 TNFRSF1AP19438 455 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 COL8A2P25067 703 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 PPOXP50336 477 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 DEFA6Q01524 100 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 HERPUD1Q15011 391 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 TESK1Q15569 626 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 FAM90A2PQ658T7 463 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 ZNF600Q6ZNG1 722 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 THNSL2Q86YJ6 484 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 NRGNQ92686 78 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 LSM10Q969L4 123 aaKnown RBP17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 OR14J1Q9UGF5 321 aa17.23■□□□□ 0.35
SMIM11A-204ENST00000474455 TRBV23-1A0A0A0MS06 115 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 HSPB6O14558 160 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 CFHR2P36980 270 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 SLC25A24Q6NUK1 477 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 PSMG3-AS1Q96PY0 264 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 RNF7Q9UBF6 113 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 DOCK11Q5JSL3 2073 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 TRBV24-1A0A075B6N3 115 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 IFNA1P01562 189 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 OPN1MWP04001 364 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 OPN1MW2P0DN77 364 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 OPN1MW3P0DN78 364 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 SERF2P84101 59 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 Q6P435 159 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 SPNS3Q6ZMD2 512 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 OR10D4PQ8NGN7 298 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 Q8TCH9 128 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 GPR146Q96CH1 333 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 METRNQ9UJH8 293 aa17.22■□□□□ 0.35
SMIM11A-204ENST00000474455 PTPN13Q12923 2485 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 KIAA1324LA8MWY0 1029 aaPredicted RBP17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 NDUFS6O75380 124 aaKnown RBP17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 TRGC2P03986 189 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 ZNF787Q6DD87 383 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 Q8IYB0 196 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 DEFB108BQ8NET1 73 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 GNG13Q9P2W3 67 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 OR2W1Q9Y3N9 320 aa17.21■□□□□ 0.35
SMIM11A-204ENST00000474455 CSMD1Q96PZ7 3565 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 IGKV1-6A0A0C4DH72 117 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 IFNA10P01566 189 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 ZNF880Q6PDB4 577 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 PINX1Q96BK5 328 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 URGCP-MRPS24S4R325 110 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 TRAV24A0A0B4J272 114 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 IGHV1-69-2A0A0G2JMI3 117 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 NPIPB11E5RHQ5 1161 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 SERPINE2P07093 398 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 RAB11AP62491 216 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 ZNF146Q15072 292 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 MRPL30Q8TCC3 161 aaKnown RBP17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 RDH5Q92781 318 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 CABLES2Q9BTV7 478 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 SDF2L1Q9HCN8 221 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 TMEM106BQ9NUM4 274 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 VAX2Q9UIW0 290 aa17.2■□□□□ 0.34
SMIM11A-204ENST00000474455 POLQO75417 2590 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 ABCA12Q86UK0 2595 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 SIRPB1O00241 398 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 GOSR1O95249 250 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 OR2H2O95918 312 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 TRGC1P0CF51 173 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 PSG2P11465 335 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 HBG1P69891 147 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 HBG2P69892 147 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 CD177Q8N6Q3 437 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 NEK7Q8TDX7 302 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 RAB1BQ9H0U4 201 aa17.19■□□□□ 0.34
SMIM11A-204ENST00000474455 IGKV1D-17A0A075B6S4 117 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 TMEM178BH3BS89 294 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 DEGS1O15121 323 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 KRTAP10-9P60411 292 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 AGMATQ9BSE5 352 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 PRDM13Q9H4Q3 707 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 RPRMQ9NS64 109 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 DSCAML1Q8TD84 2053 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 HAND1O96004 215 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 C9orf152Q5JTZ5 239 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 DUX4L9Q6RFH8 374 aaPredicted RBP17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 FAM90A1Q86YD7 464 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 ZNF525Q8N782 197 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 OR10J5Q8NHC4 309 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 IGFBPL1Q8WX77 278 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 PITPNC1Q9UKF7 332 aa17.18■□□□□ 0.34
SMIM11A-204ENST00000474455 SLC33A1O00400 549 aaPredicted RBP17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 SYNGR2O43760 224 aa17.17■□□□□ 0.34
SMIM11A-204ENST00000474455 PSPNO60542 156 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms