RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DISC1C4P0D8 188 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 TSPAN15O95858 294 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 PGAM2P15259 253 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 MEF2DQ14814 521 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 SCGB2B2Q4G0G5 96 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 TCTEX1D4Q5JR98 221 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 STEAP1BQ6NZ63 245 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 UNQ5815/PRO19632Q6UWF5 114 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 SLC38A6Q8IZM9 456 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 GRPEL2Q8TAA5 225 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 ARPC1AQ92747 370 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 GPHA2Q96T91 129 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 PHB2Q99623 299 aa10.81□□□□□ -0.68
USF1-205ENST00000473969 G3V318 75 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 RBFOX2O43251 390 aaKnown RBP eCLIP10.8□□□□□ -0.68
USF1-205ENST00000473969 GSTZ1O43708 216 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 PGLYRP1O75594 196 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 HPRT1P00492 218 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 IGHG4P01861 327 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 PF4P02776 101 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 AKAIN1P0CW23 69 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 SAA1P0DJI8 122 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 UCP3P55916 312 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 EIF4EBP1Q13541 118 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 TNXAQ16473 311 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 PYDC2Q56P42 97 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 SPANXN2Q5MJ10 180 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 IDO2Q6ZQW0 420 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 MMD2Q8IY49 270 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 TINAGL1Q9GZM7 467 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 FXYD6Q9H0Q3 95 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 TPSG1Q9NRR2 321 aa10.8□□□□□ -0.68
USF1-205ENST00000473969 FOXA2Q9Y261 457 aaPredicted RBP10.8□□□□□ -0.68
USF1-205ENST00000473969 A0A1W2PN81 502 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 DPPA5A6NC42 116 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 MPPED1O15442 326 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 OR2A4O95047 310 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 CD74P04233 296 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 RLN1P04808 185 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 CRYGBP07316 175 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 SLC6A1P30531 599 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 CHRNA7P36544 502 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 ERVK-16P61578 105 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 RPL23AP62750 156 aaKnown RBP10.79□□□□□ -0.68
USF1-205ENST00000473969 PRSS8Q16651 343 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 PHLDA2Q53GA4 152 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 AKIRIN2Q53H80 203 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 LFNGQ8NES3 379 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 ZFAND1Q8TCF1 268 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 RHOVQ96L33 236 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 TMEM68Q96MH6 324 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 OR2A7Q96R45 310 aa10.79□□□□□ -0.68
USF1-205ENST00000473969 FAM103A1Q9BTL3 118 aaKnown RBP10.79□□□□□ -0.68
USF1-205ENST00000473969 RPLP1P05386 114 aaKnown RBP10.78□□□□□ -0.68
USF1-205ENST00000473969 NQO2P16083 231 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 F2RP25116 425 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 PTBP1P26599 531 aaKnown RBP eCLIP10.78□□□□□ -0.68
USF1-205ENST00000473969 ECI1P42126 302 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 CRIP2P52943 208 aaPredicted RBP10.78□□□□□ -0.68
USF1-205ENST00000473969 TAS2R31P59538 309 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 NDPQ00604 133 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 CFHR3Q02985 330 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 PJVKQ0ZLH3 352 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 SSX9Q7RTT3 188 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 ZNF695Q8IW36 515 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 KLHL30-AS1Q8NEE0 82 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 DMBX1Q8NFW5 382 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 OR5M8Q8NGP6 311 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 TERB2Q8NHR7 220 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 ZNF486Q96H40 463 aaPredicted RBP10.78□□□□□ -0.68
USF1-205ENST00000473969 THAP7Q9BT49 309 aaPredicted RBP10.78□□□□□ -0.68
USF1-205ENST00000473969 RSRP1Q9BUV0 290 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 PLEKHA2Q9HB19 425 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 HRASLSQ9HDD0 168 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 ZNF355PQ9NSJ1 428 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 NUBP2Q9Y5Y2 271 aa10.78□□□□□ -0.68
USF1-205ENST00000473969 ADARB2-AS1A8MUL3 147 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 RAMP3O60896 148 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 KBTBD11O94819 623 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 PSMB8P28062 276 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 PPIFP30405 207 aaKnown RBP10.77□□□□□ -0.69
USF1-205ENST00000473969 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
USF1-205ENST00000473969 AP3S2P59780 193 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 VKORC1L1Q8N0U8 176 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 Q8N402 240 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 OR4A5Q8NH83 315 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 SOSTQ9BQB4 213 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 ZNF430Q9H8G1 570 aaPredicted RBP10.77□□□□□ -0.69
USF1-205ENST00000473969 COMMD9Q9P000 198 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 SCP2D1Q9UJQ7 156 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 FBXO7Q9Y3I1 522 aa10.77□□□□□ -0.69
USF1-205ENST00000473969 ANKRD20A5PA0PJZ0 165 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 MSGN1A6NI15 193 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 ARPC1BO15143 372 aaKnown RBP10.76□□□□□ -0.69
USF1-205ENST00000473969 EGR2P11161 476 aaPredicted RBP10.76□□□□□ -0.69
USF1-205ENST00000473969 CD33P20138 364 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 MAS1LP35410 378 aa10.76□□□□□ -0.69
USF1-205ENST00000473969 LPAR6P43657 344 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms