RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 RNF126Q9BV68 326 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 SLA2Q9H6Q3 261 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 HIF1ANQ9NWT6 349 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 CACNG5Q9UF02 275 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 LSM5Q9Y4Y9 91 aaKnown RBP8.69□□□□□ -1.02
SP140-208ENST00000473711 HILPDAQ9Y5L2 63 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 MMP24Q9Y5R2 645 aa8.69□□□□□ -1.02
SP140-208ENST00000473711 IGHV3OR16-10A0A075B7F0 116 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 TRAV20A0A0B4J274 112 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 IGHV1-3A0A0C4DH29 117 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 H0YIZ8 118 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 MBPP02686 304 aaPredicted RBP8.68□□□□□ -1.02
SP140-208ENST00000473711 SLC25A4P12235 298 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 NQO2P16083 231 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 PAX6P26367 422 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 UBE2E1P51965 193 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 LGALS4P56470 323 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 ERVK-16P61578 105 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 SMCO1Q147U7 214 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 CXorf66Q5JRM2 361 aaPredicted RBP8.68□□□□□ -1.02
SP140-208ENST00000473711 C11orf87Q6NUJ2 197 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 DMBX1Q8NFW5 382 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 C17orf50Q8WW18 174 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 C7orf69Q9H7B7 122 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 AUP1Q9Y679 476 aa8.68□□□□□ -1.02
SP140-208ENST00000473711 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
SP140-208ENST00000473711 CENPVL3A0A0U1RRI6 287 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MARCH11A6NNE9 402 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 SRRM4A7MD48 611 aaKnown RBP8.67□□□□□ -1.02
SP140-208ENST00000473711 K7EPK0 472 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 SHOXO15266 292 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 ST8SIA3O43173 380 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 PITX3O75364 302 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 HRASP01112 189 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 TGFAP01135 160 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 RLN2P04090 185 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 IGKV1-16P04430 117 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 OR9G9P0C7N8 305 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 P0C879 139 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 SLC25A6P12236 298 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MC5RP33032 325 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 CEACAM3P40198 252 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 NKX2-1P43699 371 aaPredicted RBP8.67□□□□□ -1.02
SP140-208ENST00000473711 RPS16P62249 146 aaKnown RBP8.67□□□□□ -1.02
SP140-208ENST00000473711 SSX2Q16385 188 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MINOS1Q5TGZ0 78 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 LAMTOR1Q6IAA8 161 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 DHRS7BQ6IAN0 325 aaPredicted RBP8.67□□□□□ -1.02
SP140-208ENST00000473711 ZNF546Q86UE3 836 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 FAM71E2Q8N5Q1 922 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 WFDC11Q8NEX6 87 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 CREBBPQ92793 2442 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 FLYWCH2Q96CP2 140 aaKnown RBP8.67□□□□□ -1.02
SP140-208ENST00000473711 RITA1Q96K30 269 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MAGT1Q9H0U3 335 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 OR5AC2Q9NZP5 309 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 NSG2Q9Y328 171 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 WASHC3Q9Y3C0 194 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 MINOS1-NBL1R4GNA1 71 aa8.67□□□□□ -1.02
SP140-208ENST00000473711 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 TRAV3A0A0B4J244 114 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 A0A1W2PPI3 338 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 HMSDA8MTL9 139 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 NPFFO15130 113 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 ARPC5O15511 151 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 TXNL1O43396 289 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 KCNAB3O43448 404 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 RBMXL2O75526 392 aaKnown RBP8.66□□□□□ -1.02
SP140-208ENST00000473711 IGHV4-31P0DP07 118 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 POLR2GP62487 172 aaKnown RBP eCLIP8.66□□□□□ -1.02
SP140-208ENST00000473711 ID3Q02535 119 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 TMEM249Q2WGJ8 235 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
SP140-208ENST00000473711 MIDNQ504T8 468 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 PRSS54Q6PEW0 395 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 PDPNQ86YL7 162 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 DYNAPQ8N1N2 210 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 DCUN1D4Q92564 292 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 RHOVQ96L33 236 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 PLSCR3Q9NRY6 295 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.66□□□□□ -1.02
SP140-208ENST00000473711 TMEM140Q9NV12 185 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 RCL1Q9Y2P8 373 aaKnown RBP8.66□□□□□ -1.02
SP140-208ENST00000473711 TBL2Q9Y4P3 447 aaKnown RBP8.66□□□□□ -1.02
SP140-208ENST00000473711 POMT1Q9Y6A1 747 aa8.66□□□□□ -1.02
SP140-208ENST00000473711 IGHV1-69DA0A0B4J2H0 117 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 ANKRD34BA5PLL1 514 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 TIMM23O14925 209 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 DEDDO75618 318 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 IGHV1-69P01742 117 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 LYL1P12980 280 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 CXCL2P19875 107 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 GATA3P23771 443 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 RAB13P51153 203 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 RUSC1-AS1Q66K80 236 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 OR4A47Q6IF82 309 aa8.65□□□□□ -1.02
SP140-208ENST00000473711 TMEM65Q6PI78 240 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms