RNA–Protein interactions for RNA: ENST00000472880.1

COL9A3-210, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 959 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-210ENST00000472880 Q8N402 240 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 ZNF645Q8N7E2 425 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 SNAPC3Q92966 411 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 ISOC1Q96CN7 298 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 DCUN1D5Q9BTE7 237 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 PEMTQ9UBM1 199 aa15.06■□□□□ 0
COL9A3-210ENST00000472880 FAM223BA6NKX1 122 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 J3QRK9 145 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 TNFAIP8O95379 198 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 SAA1P0DJI8 122 aaPredicted RBP15.05■□□□□ -0
COL9A3-210ENST00000472880 CD36P16671 472 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 RHOGP84095 191 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 EXOSC2Q13868 293 aaKnown RBP15.05■□□□□ -0
COL9A3-210ENST00000472880 CDK10Q15131 360 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 KCTD9Q7L273 389 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 TPRA1Q86W33 373 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 FAM223AQ8IWN6 122 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 SPIN2AQ99865 258 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 SPIN2BQ9BPZ2 258 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 SPATA25Q9BR10 227 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 ZNF430Q9H8G1 570 aaPredicted RBP15.05■□□□□ -0
COL9A3-210ENST00000472880 SIGLEC8Q9NYZ4 499 aa15.05■□□□□ -0
COL9A3-210ENST00000472880 ELF5Q9UKW6 265 aaPredicted RBP15.05■□□□□ -0
COL9A3-210ENST00000472880 MRPS7Q9Y2R9 242 aaKnown RBP15.05■□□□□ -0
COL9A3-210ENST00000472880 NOTOA8MTQ0 251 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 FCGR3BO75015 233 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 RBMXL2O75526 392 aaKnown RBP15.04■□□□□ -0
COL9A3-210ENST00000472880 CSN3P07498 182 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 CTXN2P0C2S0 81 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 CDNFQ49AH0 187 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 MMD2Q8IY49 270 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 ST6GALNAC5Q9BVH7 336 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 TUBA4BQ9H853 241 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 AKIP1Q9NQ31 210 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 PRELID3BQ9Y3B1 194 aa15.04■□□□□ -0
COL9A3-210ENST00000472880 A0A087WXM4 84 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 TUSC2O75896 110 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 PRH1P02810 166 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 ATP5G2Q06055 141 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 OR2B11Q5JQS5 317 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 ZFAND6Q6FIF0 208 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 TSPAN14Q8NG11 270 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 RNF167Q9H6Y7 350 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 OR2W1Q9Y3N9 320 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 DNAH7Q8WXX0 4024 aa15.03■□□□□ -0
COL9A3-210ENST00000472880 LOC100506127A0A0U1RQW1 187 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 BMPR1BO00238 502 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 AIREO43918 545 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 SLC22A5O76082 557 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 NFYAP23511 347 aaPredicted RBP15.02■□□□□ -0
COL9A3-210ENST00000472880 SDC2P34741 201 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 C10orf55Q5SWW7 151 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 HACD4Q5VWC8 232 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 DCSTAMPQ9H295 470 aa15.02■□□□□ -0
COL9A3-210ENST00000472880 RBMX2Q9Y388 322 aaKnown RBP15.02■□□□□ -0
COL9A3-210ENST00000472880 DYNC2H1Q8NCM8 4307 aaKnown RBP15.02□□□□□ -0.01
COL9A3-210ENST00000472880 SCGNO76038 276 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 HLA-DQB1P01920 261 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 GNG2P59768 71 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 ZNF45Q02386 682 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 HAGHQ16775 308 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 SFXN4Q6P4A7 337 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 SLC25A42Q86VD7 318 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 NECAP1Q8NC96 275 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 OR2K2Q8NGT1 345 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 NUDCD2Q8WVJ2 157 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 THAP7Q9BT49 309 aaPredicted RBP15.01□□□□□ -0.01
COL9A3-210ENST00000472880 EDA2RQ9HAV5 297 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 VCX3AQ9NNX9 186 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 DAPK2Q9UIK4 370 aa15.01□□□□□ -0.01
COL9A3-210ENST00000472880 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15□□□□□ -0.01
COL9A3-210ENST00000472880 TRBV9A0A0B4J1U6 114 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 IZUMO1RA6ND01 250 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 TMEM235A6NFC5 223 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 CLEC2LP0C7M8 214 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 FAM209BQ5JX69 171 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 CNIH2Q6PI25 160 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 TTC9CQ8N5M4 171 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 OR4S2Q8NH73 311 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 VSTM2AQ8TAG5 236 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 TCTEX1D2Q8WW35 142 aa15□□□□□ -0.01
COL9A3-210ENST00000472880 IFNA6P05013 189 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 RPL30P62888 115 aaKnown RBP14.99□□□□□ -0.01
COL9A3-210ENST00000472880 MXD1Q05195 221 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 C15orf32Q32M92 178 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 TIMM50Q3ZCQ8 353 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 DYNLRB2Q8TF09 96 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 HSD17B10Q99714 261 aaKnown RBP14.99□□□□□ -0.01
COL9A3-210ENST00000472880 ZNF257Q9Y2Q1 563 aa14.99□□□□□ -0.01
COL9A3-210ENST00000472880 IGKV1D-13A0A0B4J2D9 117 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 LCE6AA0A183 80 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 DPPA5A6NC42 116 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 OR2J3O76001 311 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 KBTBD11O94819 623 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 IGKV1-13P0DP09 117 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 CD81P60033 236 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 VKORC1L1Q8N0U8 176 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 LGALS14Q8TCE9 139 aa14.98□□□□□ -0.01
COL9A3-210ENST00000472880 KCTD12Q96CX2 325 aaKnown RBP14.98□□□□□ -0.01
COL9A3-210ENST00000472880 YIPF6Q96EC8 236 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms