RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ECI1P42126 302 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 TCTEX1D4Q5JR98 221 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 SPANXN2Q5MJ10 180 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 TREML4Q6UXN2 200 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 OR51H1Q8NH63 302 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 ARPC1AQ92747 370 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 TMEM68Q96MH6 324 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 SOSTQ9BQB4 213 aa11.17□□□□□ -0.62
BRCA1-211ENST00000472490 SRRM4A7MD48 611 aaKnown RBP11.16□□□□□ -0.62
BRCA1-211ENST00000472490 DISC1C4P0D8 188 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 HPRT1P00492 218 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 CRYGBP07316 175 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 AKAIN1P0CW23 69 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 CRIP2P52943 208 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-211ENST00000472490 FXYD3Q14802 87 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 AKIRIN2Q53H80 203 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 R3HDM4Q96D70 268 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 ZNF486Q96H40 463 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-211ENST00000472490 TINAGL1Q9GZM7 467 aaPredicted RBP11.16□□□□□ -0.62
BRCA1-211ENST00000472490 FXYD6Q9H0Q3 95 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 PLEKHA2Q9HB19 425 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
BRCA1-211ENST00000472490 A0A1W2PRX2 142 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 OR2A4O95047 310 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 RLN1P04808 185 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 SAA1P0DJI8 122 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-211ENST00000472490 PF4V1P10720 104 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 PGAM2P15259 253 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 F2RP25116 425 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 PPIFP30405 207 aaKnown RBP11.15□□□□□ -0.62
BRCA1-211ENST00000472490 FAUP35544 74 aaKnown RBP11.15□□□□□ -0.62
BRCA1-211ENST00000472490 TAS2R31P59538 309 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 AP3S2P59780 193 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 GNB1P62873 340 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 CFHR3Q02985 330 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 PRSS8Q16651 343 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 ECSCRQ19T08 205 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 SCGB2B2Q4G0G5 96 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 PYDC2Q56P42 97 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 LHFPL1Q86WI0 220 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 MMD2Q8IY49 270 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 RNF152Q8N8N0 203 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 OR5M8Q8NGP6 311 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 TERB2Q8NHR7 220 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 ZFAND1Q8TCF1 268 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 RHOVQ96L33 236 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 OR2A7Q96R45 310 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 GPHA2Q96T91 129 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 THAP7Q9BT49 309 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-211ENST00000472490 RSRP1Q9BUV0 290 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 TPSG1Q9NRR2 321 aa11.15□□□□□ -0.62
BRCA1-211ENST00000472490 FOXA2Q9Y261 457 aaPredicted RBP11.15□□□□□ -0.62
BRCA1-211ENST00000472490 A0A1W2PN81 502 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 ANKRD20A5PA0PJZ0 165 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 G3V318 75 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 RAMP3O60896 148 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 TSPAN15O95858 294 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 NQO2P16083 231 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 PSMB8P28062 276 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 CHRNA7P36544 502 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 ETV6P41212 452 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 ERVK-16P61578 105 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 RPL23AP62750 156 aaKnown RBP11.14□□□□□ -0.63
BRCA1-211ENST00000472490 NDPQ00604 133 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 PHLDA2Q53GA4 152 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 UNQ5815/PRO19632Q6UWF5 114 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 IDO2Q6ZQW0 420 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 CCDC190Q86UF4 302 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 Q8N402 240 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 MINDY2Q8NBR6 621 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 OR4A5Q8NH83 315 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 GRPEL2Q8TAA5 225 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 DEDD2Q8WXF8 326 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 PRRT1Q99946 306 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 FAM212BQ9NTI7 297 aaPredicted RBP11.14□□□□□ -0.63
BRCA1-211ENST00000472490 COMMD9Q9P000 198 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 NUBP2Q9Y5Y2 271 aa11.14□□□□□ -0.63
BRCA1-211ENST00000472490 ADARB2-AS1A8MUL3 147 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 KBTBD11O94819 623 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 MAS1LP35410 378 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 BRWD1-AS2P59051 145 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 TNXAQ16473 311 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 LFNGQ8NES3 379 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 OR4D10Q8NGI6 311 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 OR6Q1Q8NGQ2 317 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 FAM110DQ8TAY7 271 aaPredicted RBP11.13□□□□□ -0.63
BRCA1-211ENST00000472490 PHB2Q99623 299 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 SPIN2AQ99865 258 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 SPIN2BQ9BPZ2 258 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 FAM103A1Q9BTL3 118 aaKnown RBP11.13□□□□□ -0.63
BRCA1-211ENST00000472490 SLC2A9Q9NRM0 540 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 SCP2D1Q9UJQ7 156 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 V9GYH0 126 aa11.13□□□□□ -0.63
BRCA1-211ENST00000472490 ARPC1BO15143 372 aaKnown RBP11.12□□□□□ -0.63
BRCA1-211ENST00000472490 PF4P02776 101 aa11.12□□□□□ -0.63
BRCA1-211ENST00000472490 RPLP1P05386 114 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms