RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 C10orf55Q5SWW7 151 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 OVCH2Q7RTZ1 564 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 HAPLN4Q86UW8 402 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 ADAD2Q8NCV1 583 aaKnown RBP6.92□□□□□ -1.3
USF1-204ENST00000472217 BEST4Q8NFU0 473 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 OR6Q1Q8NGQ2 317 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 TCTEX1D2Q8WW35 142 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 OR4C12Q96R67 309 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 ASCL2Q99929 193 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 DCUN1D5Q9BTE7 237 aa6.92□□□□□ -1.3
USF1-204ENST00000472217 RANGRFQ9HD47 186 aaPredicted RBP6.92□□□□□ -1.3
USF1-204ENST00000472217 MRPS7Q9Y2R9 242 aaKnown RBP6.92□□□□□ -1.3
USF1-204ENST00000472217 A0A0A6YYH2 397 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 A6NJ64 397 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 MPPED1O15442 326 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 CREBL2O60519 120 aaPredicted RBP6.91□□□□□ -1.3
USF1-204ENST00000472217 TRBV12-3P01733 135 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 FCER2P06734 321 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 OR9G9P0C7N8 305 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 PTHLHP12272 177 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 GP9P14770 177 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 ZP3P21754 424 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 TGFBR1P36897 503 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 BRWD1-AS2P59051 145 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 ARPC4P59998 168 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 EIF4EBP1Q13541 118 aaPredicted RBP6.91□□□□□ -1.3
USF1-204ENST00000472217 ZNF343Q6P1L6 599 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 MMD2Q8IY49 270 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 VKORC1L1Q8N0U8 176 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 GPHA2Q96T91 129 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 HSD17B10Q99714 261 aaKnown RBP6.91□□□□□ -1.3
USF1-204ENST00000472217 RSRP1Q9BUV0 290 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 ELOVL1Q9BW60 279 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 AUNIPQ9H7T9 357 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 TAS2R8Q9NYW2 309 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 SPATA2Q9UM82 520 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 U3KQK5 164 aa6.91□□□□□ -1.3
USF1-204ENST00000472217 TRIM64CA6NLI5 447 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 ACTL6BO94805 426 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 IGLV1-51P01701 117 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 PRH1P02810 166 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 ZNF45Q02386 682 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 KLF5Q13887 457 aaPredicted RBP6.9□□□□□ -1.3
USF1-204ENST00000472217 TIMM50Q3ZCQ8 353 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 ZNF66Q6ZN08 573 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 HOGA1Q86XE5 327 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 MFSD4AQ8N468 514 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 OR13F1Q8NGS4 319 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 OR4S2Q8NH73 311 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 SECTM1Q8WVN6 248 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 SNAPC3Q92966 411 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 USMG5Q96IX5 58 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 SPIN2AQ99865 258 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 SPIN2BQ9BPZ2 258 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 AKIP1Q9NQ31 210 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 DIABLOQ9NR28 239 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 CCL28Q9NRJ3 127 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 PEF1Q9UBV8 284 aaKnown RBP6.9□□□□□ -1.3
USF1-204ENST00000472217 ADAM30Q9UKF2 790 aa6.9□□□□□ -1.3
USF1-204ENST00000472217 TRBV9A0A0B4J1U6 114 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 HMX3A6NHT5 357 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 FAM223BA6NKX1 122 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 TEX22C9J3V5 150 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 TNFSF12O43508 249 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 AIREO43918 545 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 TMEM127O75204 238 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 KBTBD11O94819 623 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 PPYP01298 95 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 FRMD6-AS1P0C7T7 363 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 FCGR2CP31995 323 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 RPS19P39019 145 aaKnown RBP6.89□□□□□ -1.31
USF1-204ENST00000472217 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 RHOGP84095 191 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 EXOSC2Q13868 293 aaKnown RBP6.89□□□□□ -1.31
USF1-204ENST00000472217 MSMO1Q15800 293 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 IL34Q6ZMJ4 242 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 ANKRD13BQ86YJ7 626 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 SBSPONQ8IVN8 264 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 FAM223AQ8IWN6 122 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 PUSL1Q8N0Z8 303 aaKnown RBP6.89□□□□□ -1.31
USF1-204ENST00000472217 TTC9CQ8N5M4 171 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 VSTM2AQ8TAG5 236 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 TMEM167AQ8TBQ9 72 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 YIPF6Q96EC8 236 aa6.89□□□□□ -1.31
USF1-204ENST00000472217 A0A087WXM4 84 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 A0A1B0GW64 132 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 MEIS3P1A6NDR6 274 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 E7EUB6 86 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 BMPR1BO00238 502 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 XRCC3O43542 346 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 OR2A4O95047 310 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 TNFAIP8O95379 198 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 IL6RP08887 468 aaPredicted RBP6.88□□□□□ -1.31
USF1-204ENST00000472217 KIR2DS2P43631 304 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 CBX5P45973 191 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 RPL27AP46776 148 aaKnown RBP6.88□□□□□ -1.31
USF1-204ENST00000472217 FXYD4P59646 89 aa6.88□□□□□ -1.31
USF1-204ENST00000472217 LSM3P62310 102 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms