RNA–Protein interactions for RNA: ENST00000470199.2

LMNA-211, Transcript of lamin A/C, human

TSL 4

Gene LMNA, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-211	ENST00000470199	ZNF562	Q6V9R5	426 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	OR6Q1	Q8NGQ2	317 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	OR4S2	Q8NH73	311 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	ABHD5	Q8WTS1	349 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	CASTOR1	Q8WTX7	329 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	MRGPRF	Q96AM1	343 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	RSRP1	Q9BUV0	290 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	NUBP2	Q9Y5Y2	271 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	CMYA5	Q8N3K9	4069 aa		13.98	□□□□□ -0.17
LMNA-211	ENST00000470199	GPR31	O00270	319 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	SOX15	O60248	233 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	S100A5	P33763	92 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	SSBP1	Q04837	148 aa	Known RBP	13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	VMA21	Q3ZAQ7	101 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	PYDC2	Q56P42	97 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	SSX9	Q7RTT3	188 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	TEX45	Q8NA69	505 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	OR4C16	Q8NGL9	310 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	GRPEL2	Q8TAA5	225 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	KLK15	Q9H2R5	256 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	RABL2A	Q9UBK7	228 aa	Predicted RBP	13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	ZNF580	Q9UK33	172 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	RABL2B	Q9UNT1	228 aa		13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.97	□□□□□ -0.17
LMNA-211	ENST00000470199	PKD1L1	Q8TDX9	2849 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	PLXNB1	O43157	2135 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	ANKRD20A5P	A0PJZ0	165 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	S1PR2	O95136	353 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	IGHG4	P01861	327 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	TBP	P20226	339 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	CRIP2	P52943	208 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	PPP5C	P53041	499 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	UCP3	P55916	312 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	CATR1	Q13166	79 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	PRSS8	Q16651	343 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	SCGB2B2	Q4G0G5	96 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	TEX38	Q6PEX7	206 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	ARRDC1	Q8N5I2	433 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	MINDY2	Q8NBR6	621 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	LFNG	Q8NES3	379 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	ARPC1A	Q92747	370 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	R3HDM4	Q96D70	268 aa		13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	THAP7	Q9BT49	309 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-211	ENST00000470199	ZNF430	Q9H8G1	570 aa	Predicted RBP	13.96	□□□□□ -0.17
LMNA-211	ENST00000470199		A6NHS1	94 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	OPN1MW	P04001	364 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	APELA	P0DMC3	54 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	OPN1MW2	P0DN77	364 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	OPN1MW3	P0DN78	364 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	MYOD1	P15172	320 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	PGAM2	P15259	253 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	RPA2	P15927	270 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	KIR2DS2	P43631	304 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	RPL23A	P62750	156 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	ZNF585B	Q52M93	769 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	C10orf55	Q5SWW7	151 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	ASPHD1	Q5U4P2	390 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	TBC1D26	Q86UD7	250 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	PUSL1	Q8N0Z8	303 aa	Known RBP	13.95	□□□□□ -0.18
LMNA-211	ENST00000470199	TRIM63	Q969Q1	353 aa		13.95	□□□□□ -0.18
LMNA-211	ENST00000470199		A0A1W2PN81	502 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	CNIH1	O95406	144 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	IGLV1-40	P01703	118 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	AKAIN1	P0CW23	69 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	PSMB8	P28062	276 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	CHRNA7	P36544	502 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	LPAR6	P43657	344 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	FOXE3	Q13461	319 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	KIAA0141	Q14154	515 aa	Predicted RBP	13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	TNXA	Q16473	311 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	UNQ5815/PRO19632	Q6UWF5	114 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	CMTM1	Q8IZ96	169 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	SLC38A6	Q8IZM9	456 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199		Q8N402	240 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	COMMD1	Q8N668	190 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	RNF152	Q8N8N0	203 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	TERB2	Q8NHR7	220 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	MARCH1	Q8TCQ1	289 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	BORCS5	Q969J3	196 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	RHOV	Q96L33	236 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	GON7	Q9BXV9	100 aa		13.94	□□□□□ -0.18
LMNA-211	ENST00000470199	TRAV3	A0A0B4J244	114 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	HPRT1	P00492	218 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	ELANE	P08246	267 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	F2R	P25116	425 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	ETV6	P41212	452 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	OR4A47	Q6IF82	309 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	LPCAT3	Q6P1A2	487 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	OR13C8	Q8NGS7	320 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	SLC2A9	Q9NRM0	540 aa		13.93	□□□□□ -0.18
LMNA-211	ENST00000470199	MSGN1	A6NI15	193 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199		E7EUB6	86 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	KBTBD11	O94819	623 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	OR2A4	O95047	310 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	HRAS	P01112	189 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	PF4V1	P10720	104 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	KLF9	Q13886	244 aa	Predicted RBP	13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	MEF2D	Q14814	521 aa		13.92	□□□□□ -0.18
LMNA-211	ENST00000470199	AKIRIN2	Q53H80	203 aa		13.92	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms