RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 NQO2P16083 231 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 VAMP1P23763 118 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 CNTFRP26992 372 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 LPAR6P43657 344 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 UBE2KP61086 200 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 ERVK-16P61578 105 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 SRPXP78539 464 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 PLGLAQ15195 96 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 PSG5Q15238 335 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 TRIM16LQ309B1 348 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 SP6Q3SY56 376 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 PLET1Q6UQ28 207 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 FAM71E2Q8N5Q1 922 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 RASL11BQ9BPW5 248 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 TMEM222Q9H0R3 208 aa12.11□□□□□ -0.47
SNIP1-202ENST00000468040 ALX4Q9H161 411 aaPredicted RBP12.11□□□□□ -0.47
SNIP1-202ENST00000468040 METTL1Q9UBP6 276 aaKnown RBP12.11□□□□□ -0.47
SNIP1-202ENST00000468040 SRRM4A7MD48 611 aaKnown RBP12.1□□□□□ -0.47
SNIP1-202ENST00000468040 SLC25A17O43808 307 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 CREBL2O60519 120 aaPredicted RBP12.1□□□□□ -0.47
SNIP1-202ENST00000468040 ATG12O94817 140 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 IGLV2-23P01705 113 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 H2AFB2P0C5Z0 115 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 ANXA7P20073 488 aaKnown RBP12.1□□□□□ -0.47
SNIP1-202ENST00000468040 MECP2P51608 486 aaKnown RBP12.1□□□□□ -0.47
SNIP1-202ENST00000468040 SUPT4H1P63272 117 aaKnown RBP12.1□□□□□ -0.47
SNIP1-202ENST00000468040 PPP1R1AQ13522 171 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 POU2AF1Q16633 256 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 C5orf64Q2M2E5 130 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 C4orf46Q504U0 113 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 PRIMA1Q86XR5 153 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 TEX45Q8NA69 505 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 DMBX1Q8NFW5 382 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 GLYATL2Q8WU03 294 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 R3HDM4Q96D70 268 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 RHOVQ96L33 236 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 FBXL15Q9H469 300 aa12.1□□□□□ -0.47
SNIP1-202ENST00000468040 MARCH11A6NNE9 402 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 SFT2D2O95562 160 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 CDS2O95674 445 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
SNIP1-202ENST00000468040 AMY1AP04745 511 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 OR4E1P0C645 316 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 SAA1P0DJI8 122 aaPredicted RBP12.09□□□□□ -0.47
SNIP1-202ENST00000468040 RGS21Q2M5E4 152 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 LIN54Q6MZP7 749 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 VKORC1L1Q8N0U8 176 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 IL22RA2Q969J5 263 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 PRSS22Q9GZN4 317 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 SIGLEC9Q9Y336 463 aa12.09□□□□□ -0.47
SNIP1-202ENST00000468040 OR2A4O95047 310 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 KRASP01116 189 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 HLA-DRB1P01911 266 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 CRYGBP07316 175 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 RAG2P55895 527 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 BLCAPP62952 87 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 SRSF2Q01130 221 aaKnown RBP12.08□□□□□ -0.48
SNIP1-202ENST00000468040 DHRS2Q13268 280 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM187Q14656 261 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 PPP1R27Q86WC6 154 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 ZNF695Q8IW36 515 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 PUSL1Q8N0Z8 303 aaKnown RBP12.08□□□□□ -0.48
SNIP1-202ENST00000468040 CADM3Q8N126 398 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 LGI3Q8N145 548 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 OR4A5Q8NH83 315 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 RBPMSQ93062 196 aaKnown RBP12.08□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM56Q96MV1 263 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 OR2A7Q96R45 310 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 BET1LQ9NYM9 111 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM56-RWDD3S4R434 201 aa12.08□□□□□ -0.48
SNIP1-202ENST00000468040 C9orf170A2RU37 121 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 TSPAN9O75954 239 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 KBTBD11O94819 623 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 NDUFA7O95182 113 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 IGKV1-39P01597 117 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 IGKV1D-39P04432 117 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 G6PCP35575 357 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 AKR1C2P52895 323 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 RAB25P57735 213 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM268Q5VZI3 342 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 OR4A47Q6IF82 309 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 SSX9Q7RTT3 188 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 LYG2Q86SG7 212 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 Q8N2B8 174 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 CASTOR1Q8WTX7 329 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 MARVELD1Q9BSK0 173 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 BEX1Q9HBH7 125 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM140Q9NV12 185 aa12.07□□□□□ -0.48
SNIP1-202ENST00000468040 NIPBLQ6KC79 2804 aaeCLIP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 INMT-MINDY4F8WBC2 141 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 KCNAB3O43448 404 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 ACTL6BO94805 426 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 DUS4LO95620 317 aaKnown RBP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 FGF2P09038 288 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 RIPPLY3P57055 190 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 PRSS8Q16651 343 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 ARSJQ5FYB0 599 aaPredicted RBP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 C9orf152Q5JTZ5 239 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 Q6ZSV7 163 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 H2BFWTQ7Z2G1 175 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms