RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 PBDC1Q9BVG4 233 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 WDR61Q9GZS3 305 aaKnown RBP16.8■□□□□ 0.28
CCDC78-207ENST00000466708 MS4A7Q9GZW8 240 aaPredicted RBP16.8■□□□□ 0.28
CCDC78-207ENST00000466708 CHD8Q9HCK8 2581 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 TRBV23-1A0A0A0MS06 115 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 RPP30P78346 268 aaKnown RBP16.8■□□□□ 0.28
CCDC78-207ENST00000466708 TAGLNQ01995 201 aaKnown RBP16.8■□□□□ 0.28
CCDC78-207ENST00000466708 TLE4Q04727 773 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 ZNF833PQ6ZTB9 187 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 RHOVQ96L33 236 aa16.8■□□□□ 0.28
CCDC78-207ENST00000466708 A0A1B0GW64 132 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 PMS2P5A8MQ11 134 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 H2AFB1P0C5Y9 115 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 OR2B8PP59922 312 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 GNB2P62879 340 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 GUK1Q16774 197 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 RTL8BQ17RB0 113 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 TMEM155Q4W5P6 130 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 ZNF596Q8TC21 504 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 AIFM2Q9BRQ8 373 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 TMEM147Q9BVK8 224 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 FBXO7Q9Y3I1 522 aa16.79■□□□□ 0.28
CCDC78-207ENST00000466708 CT45A6P0DMU7 189 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 CT45A5P0DMU8 189 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 CT45A7P0DMV0 189 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 VKORC1L1Q8N0U8 176 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 LINC00311Q8N616 119 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 TAF15Q92804 592 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC78-207ENST00000466708 RAB1BQ9H0U4 201 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 TIMM9Q9Y5J7 89 aa16.78■□□□□ 0.28
CCDC78-207ENST00000466708 GPR37O15354 613 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 SFTA3P0C7M3 94 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 COL8A2P25067 703 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 DLX6P56179 175 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 BTN1A1Q13410 526 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 FAM71F2Q6NXP2 309 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 PUSL1Q8N0Z8 303 aaKnown RBP16.77■□□□□ 0.28
CCDC78-207ENST00000466708 RSG1Q9BU20 258 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 SCRT1Q9BWW7 348 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 NKX6-2Q9C056 277 aaPredicted RBP16.77■□□□□ 0.28
CCDC78-207ENST00000466708 SMDT1Q9H4I9 107 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 CBLN4Q9NTU7 201 aa16.77■□□□□ 0.28
CCDC78-207ENST00000466708 C15orf61A6NNL5 157 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 FAM157AC9JC47 383 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 HBE1P02100 147 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 RAB2AP61019 212 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 OR4A47Q6IF82 309 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 ATRAIDQ6UW56 229 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 EIF5A2Q9GZV4 153 aaKnown RBP16.77■□□□□ 0.27
CCDC78-207ENST00000466708 SLC35D1Q9NTN3 355 aa16.77■□□□□ 0.27
CCDC78-207ENST00000466708 RALYQ9UKM9 306 aaKnown RBP16.77■□□□□ 0.27
CCDC78-207ENST00000466708 DOCK11Q5JSL3 2073 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 KALRNO60229 2985 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 A0A087X0M5 115 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 A0A1B0GX30 115 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 IGHV2-70P01814 119 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 ARG1P05089 322 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 ERVFRD-1P60508 538 aa16.76■□□□□ 0.27
CCDC78-207ENST00000466708 CENPVQ7Z7K6 275 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-207ENST00000466708 FOXA2Q9Y261 457 aaPredicted RBP16.76■□□□□ 0.27
CCDC78-207ENST00000466708 TMA7Q9Y2S6 64 aaKnown RBP16.76■□□□□ 0.27
CCDC78-207ENST00000466708 UBE2L5PA0A1B0GUS4 154 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 SNAPINO95295 136 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 VWC2Q2TAL6 325 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 C4orf17Q53FE4 359 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 SPINK9Q5DT21 86 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 SP5Q6BEB4 398 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-207ENST00000466708 SPSB3Q6PJ21 355 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 OR13D1Q8NGV5 346 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 TMEM186Q96B77 213 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 TMEM14BQ9NUH8 114 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 TRAV3A0A0B4J244 114 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 TRAV1-1A0A0B4J248 108 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 MED19A0JLT2 244 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-207ENST00000466708 NBASA2RRP1 2371 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 C15orf62A8K5M9 175 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 LYNX1G3V0Z9 82 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 J3QR06 171 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 APOA2P02652 100 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 LYNX1P0DP58 116 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 VDAC2P45880 294 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-207ENST00000466708 GUCA2BQ16661 112 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 HEYLQ9NQ87 328 aaPredicted RBP16.75■□□□□ 0.27
CCDC78-207ENST00000466708 KIAA1456Q9P272 454 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 TCF19Q9Y242 345 aa16.75■□□□□ 0.27
CCDC78-207ENST00000466708 COL6A6A6NMZ7 2263 aa16.74■□□□□ 0.27
CCDC78-207ENST00000466708 IL6RP08887 468 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-207ENST00000466708 AGAP20933 346 aa16.74■□□□□ 0.27
CCDC78-207ENST00000466708 HSPE1P61604 102 aaKnown RBP16.74■□□□□ 0.27
CCDC78-207ENST00000466708 OR10X1Q8NGY0 326 aa16.74■□□□□ 0.27
CCDC78-207ENST00000466708 OSR1Q8TAX0 266 aaPredicted RBP16.74■□□□□ 0.27
CCDC78-207ENST00000466708 RBMXL1Q96E39 390 aaKnown RBP16.74■□□□□ 0.27
CCDC78-207ENST00000466708 PRNDQ9UKY0 176 aa16.74■□□□□ 0.27
CCDC78-207ENST00000466708 KPTNQ9Y664 436 aa16.74■□□□□ 0.27
CCDC78-207ENST00000466708 C9JQL5 133 aa16.73■□□□□ 0.27
CCDC78-207ENST00000466708 IGHV1-8P0DP01 117 aa16.73■□□□□ 0.27
CCDC78-207ENST00000466708 C11orf71Q6IPW1 123 aa16.73■□□□□ 0.27
CCDC78-207ENST00000466708 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.73■□□□□ 0.27
CCDC78-207ENST00000466708 OR5AN1Q8NGI8 311 aa16.73■□□□□ 0.27
CCDC78-207ENST00000466708 OR9G1Q8NH87 305 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms