RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 LYSTQ99698 3801 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 FAM223BA6NKX1 122 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 CREBL2O60519 120 aaPredicted RBP14.57□□□□□ -0.08
COL9A3-206ENST00000466532 FCGR3BO75015 233 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 ACTL6BO94805 426 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 OR2A4O95047 310 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 RHOGP84095 191 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 EXOSC2Q13868 293 aaKnown RBP14.57□□□□□ -0.08
COL9A3-206ENST00000466532 KCTD9Q7L273 389 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 FAM223AQ8IWN6 122 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 Q8N402 240 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 SIGLEC8Q9NYZ4 499 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 PEMTQ9UBM1 199 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 OR2W1Q9Y3N9 320 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 TENM2Q9NT68 2774 aa14.57□□□□□ -0.08
COL9A3-206ENST00000466532 TUSC2O75896 110 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 CTXN2P0C2S0 81 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 NFYAP23511 347 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-206ENST00000466532 ZNF45Q02386 682 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 ATP5G2Q06055 141 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 OR2B11Q5JQS5 317 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 HACD4Q5VWC8 232 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 ZFAND6Q6FIF0 208 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 MMD2Q8IY49 270 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 ISOC1Q96CN7 298 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 SPIN2AQ99865 258 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 SPIN2BQ9BPZ2 258 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 SPATA25Q9BR10 227 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 THAP7Q9BT49 309 aaPredicted RBP14.56□□□□□ -0.08
COL9A3-206ENST00000466532 EDA2RQ9HAV5 297 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 MRPS7Q9Y2R9 242 aaKnown RBP14.56□□□□□ -0.08
COL9A3-206ENST00000466532 PRELID3BQ9Y3B1 194 aa14.56□□□□□ -0.08
COL9A3-206ENST00000466532 TRBV9A0A0B4J1U6 114 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 IZUMO1RA6ND01 250 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 NOTOA8MTQ0 251 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 BMPR1BO00238 502 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 HLA-DQB1P01920 261 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 CD36P16671 472 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 GABARAPL2P60520 117 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 HAGHQ16775 308 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 C10orf55Q5SWW7 151 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 NUDCD2Q8WVJ2 157 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 DCSTAMPQ9H295 470 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 TUBA4BQ9H853 241 aa14.55□□□□□ -0.08
COL9A3-206ENST00000466532 RBMX2Q9Y388 322 aaKnown RBP14.55□□□□□ -0.08
COL9A3-206ENST00000466532 SLC22A5O76082 557 aa14.54□□□□□ -0.08
COL9A3-206ENST00000466532 RPL30P62888 115 aaKnown RBP14.54□□□□□ -0.08
COL9A3-206ENST00000466532 CNIH2Q6PI25 160 aa14.54□□□□□ -0.08
COL9A3-206ENST00000466532 VKORC1L1Q8N0U8 176 aa14.54□□□□□ -0.08
COL9A3-206ENST00000466532 TTC9CQ8N5M4 171 aa14.54□□□□□ -0.08
COL9A3-206ENST00000466532 TXNL4BQ9NX01 149 aaKnown RBP14.54□□□□□ -0.08
COL9A3-206ENST00000466532 RAB26Q9ULW5 256 aa14.54□□□□□ -0.08
COL9A3-206ENST00000466532 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.53□□□□□ -0.08
COL9A3-206ENST00000466532 IGKV1D-13A0A0B4J2D9 117 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 TMEM235A6NFC5 223 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 AIREO43918 545 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 OR2J3O76001 311 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 IGLV2-14P01704 120 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 IGKV1-13P0DP09 117 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 FGF9P31371 208 aaPredicted RBP14.53□□□□□ -0.08
COL9A3-206ENST00000466532 MECP2P51608 486 aaKnown RBP14.53□□□□□ -0.08
COL9A3-206ENST00000466532 UBE2UQ5VVX9 321 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 NECAP1Q8NC96 275 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 OR2K2Q8NGT1 345 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 OR51E2Q9H255 320 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 GAR1Q9NY12 217 aaKnown RBP14.53□□□□□ -0.08
COL9A3-206ENST00000466532 DAPK2Q9UIK4 370 aa14.53□□□□□ -0.08
COL9A3-206ENST00000466532 HMX3A6NHT5 357 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 MRPS14O60783 128 aaKnown RBP14.52□□□□□ -0.09
COL9A3-206ENST00000466532 SCGNO76038 276 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 PSMB9P28065 219 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 GNG2P59768 71 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 SLC25A42Q86VD7 318 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 OR4S2Q8NH73 311 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 TCTEX1D2Q8WW35 142 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 HSD17B10Q99714 261 aaKnown RBP14.52□□□□□ -0.09
COL9A3-206ENST00000466532 SPATA2Q9UM82 520 aa14.52□□□□□ -0.09
COL9A3-206ENST00000466532 LCE6AA0A183 80 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 SSX5O60225 188 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 KBTBD11O94819 623 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 IFNA6P05013 189 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 C15orf32Q32M92 178 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 TPRA1Q86W33 373 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 SPARTQ8N0X7 666 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 VSTM2AQ8TAG5 236 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 LGALS14Q8TCE9 139 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 KCTD12Q96CX2 325 aaKnown RBP14.51□□□□□ -0.09
COL9A3-206ENST00000466532 OR2A7Q96R45 310 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 ANXA10Q9UJ72 324 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 ZNF257Q9Y2Q1 563 aa14.51□□□□□ -0.09
COL9A3-206ENST00000466532 RRP15Q9Y3B9 282 aaKnown RBP14.51□□□□□ -0.09
COL9A3-206ENST00000466532 DPPA5A6NC42 116 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 TEX22C9J3V5 150 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 PPP5D1E7EU14 171 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 RPL27AP46776 148 aaKnown RBP14.5□□□□□ -0.09
COL9A3-206ENST00000466532 CD81P60033 236 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 EIF4EBP1Q13541 118 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-206ENST00000466532 CD300EQ496F6 205 aaPredicted RBP14.5□□□□□ -0.09
COL9A3-206ENST00000466532 FAM209BQ5JX69 171 aa14.5□□□□□ -0.09
COL9A3-206ENST00000466532 ADAMTSL5Q6ZMM2 481 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms