RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 HAPLN4Q86UW8 402 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 FAM223AQ8IWN6 122 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 SGPP2Q8IWX5 399 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 MMD2Q8IY49 270 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 ACOT12Q8WYK0 555 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 ZNF430Q9H8G1 570 aaPredicted RBP10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 SSR3Q9UNL2 185 aa10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 MRPS7Q9Y2R9 242 aaKnown RBP10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 RBMX2Q9Y388 322 aaKnown RBP10.96□□□□□ -0.65
SNRNP40-203ENST00000463988 SMIM30A4D0T7 59 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 TMEM235A6NFC5 223 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 MPPED1O15442 326 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 FCGR3BO75015 233 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 RBMXL2O75526 392 aaKnown RBP10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 IGLV2-14P01704 120 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 CSN3P07498 182 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 NFYAP23511 347 aaPredicted RBP10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 SCAND1P57086 179 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 GNG2P59768 71 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 RHOGP84095 191 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 RPEL1Q2QD12 228 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 FAM209BQ5JX69 171 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 SFXN4Q6P4A7 337 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 KCTD9Q7L273 389 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 SLC25A42Q86VD7 318 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 TTC9CQ8N5M4 171 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 NUDCD2Q8WVJ2 157 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 HSD17B10Q99714 261 aaKnown RBP10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 DCUN1D5Q9BTE7 237 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 Q9H521 79 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 DAPK2Q9UIK4 370 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 ANXA10Q9UJ72 324 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 DNAH7Q8WXX0 4024 aa10.95□□□□□ -0.66
SNRNP40-203ENST00000463988 AIREO43918 545 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 TUSC2O75896 110 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 TRBV12-3P01733 135 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 APELAP0DMC3 54 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 MECP2P51608 486 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 RPL30P62888 115 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 ATP5G2Q06055 141 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 EIF4EBP1Q13541 118 aaPredicted RBP10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 CASC10Q5T4H9 136 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 LCN12Q6JVE5 192 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 NECAP1Q8NC96 275 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 OR4S2Q8NH73 311 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 VSTM2AQ8TAG5 236 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 CITED4Q96RK1 184 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 OR51E2Q9H255 320 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 AKIP1Q9NQ31 210 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 RHBDL2Q9NX52 303 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 PEMTQ9UBM1 199 aa10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 RRP15Q9Y3B9 282 aaKnown RBP10.94□□□□□ -0.66
SNRNP40-203ENST00000463988 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 IGKV1D-13A0A0B4J2D9 117 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 J3QRK9 145 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 SSX5O60225 188 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 ATP6V1G2O95670 118 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 IGKV1-13P0DP09 117 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 SDC2P34741 201 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 DEFA5Q01523 94 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 ZNF45Q02386 682 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 MSMO1Q15800 293 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 Q8N402 240 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 LGALS14Q8TCE9 139 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 THAP7Q9BT49 309 aaPredicted RBP10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 ZNF257Q9Y2Q1 563 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 ETV7Q9Y603 341 aa10.93□□□□□ -0.66
SNRNP40-203ENST00000463988 A0A0A6YYH2 397 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 A6NJ64 397 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 BMPR1BO00238 502 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 MAS1LP35410 378 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 EXOSC2Q13868 293 aaKnown RBP10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 ZNF773Q6PK81 442 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 ZNF66Q6ZN08 573 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 PUSL1Q8N0Z8 303 aaKnown RBP10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 MFSD4AQ8N468 514 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 TMEM167AQ8TBQ9 72 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 OR2A7Q96R45 310 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 ADAM30Q9UKF2 790 aa10.92□□□□□ -0.66
SNRNP40-203ENST00000463988 NPIPB5A8MRT5 1133 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 TEX22C9J3V5 150 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 TMEM127O75204 238 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 KBTBD11O94819 623 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 PRH1P02810 166 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 LYL1P12980 280 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 BRWD1-AS2P59051 145 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 OR2B11Q5JQS5 317 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 GTSCR1Q86UQ5 136 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 BEST4Q8NFU0 473 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 TCTEX1D2Q8WW35 142 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 AIFM2Q9BRQ8 373 aa10.91□□□□□ -0.66
SNRNP40-203ENST00000463988 TENM2Q9NT68 2774 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 HRASP01112 189 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 IL6RP08887 468 aaPredicted RBP10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 ZNF735P0CB33 412 aa10.9□□□□□ -0.66
SNRNP40-203ENST00000463988 KIR2DS2P43631 304 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms