RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 AKIP1Q9NQ31 210 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF221Q9UK13 617 aa8.41□□□□□ -1.06
PTPN7-204ENST00000462815 TRBV6-7A0A0A0MS04 114 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 LOC100506127A0A0U1RQW1 187 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 TRDCB7Z8K6 153 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 ZNF701M0R085 212 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-204ENST00000462815 CNIH1O95406 144 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 APELAP0DMC3 54 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 CD81P60033 236 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 NCS1P62166 190 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 PRSS8Q16651 343 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 HSD17B12Q53GQ0 312 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 IGSF11Q5DX21 431 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 DEFB125Q8N687 156 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 OR4A4PQ8NGN8 299 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 RAB2BQ8WUD1 216 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 DGCR14Q96DF8 476 aaKnown RBP8.4□□□□□ -1.06
PTPN7-204ENST00000462815 BCL7BQ9BQE9 202 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 NEURL2Q9BR09 285 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 OR2D2Q9H210 308 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 TUBA4BQ9H853 241 aa8.4□□□□□ -1.06
PTPN7-204ENST00000462815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.39□□□□□ -1.07
PTPN7-204ENST00000462815 TRAV1-2A0A0B4J238 106 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 MSGN1A6NI15 193 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 LINC00473A8K010 186 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 H3BMQ9 156 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 DIRAS3O95661 229 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 PRH1P02810 166 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 OR9G9P0C7N8 305 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 UBE2KP61086 200 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 VBP1P61758 197 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 RPEL1Q2QD12 228 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 DEFB114Q30KQ6 69 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 TEX45Q8NA69 505 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 SRSF12Q8WXF0 261 aaKnown RBP8.39□□□□□ -1.07
PTPN7-204ENST00000462815 LINC00476Q8WZB0 136 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 CMSS1Q9BQ75 279 aaKnown RBP8.39□□□□□ -1.07
PTPN7-204ENST00000462815 URM1Q9BTM9 101 aaKnown RBP8.39□□□□□ -1.07
PTPN7-204ENST00000462815 COA4Q9NYJ1 87 aa8.39□□□□□ -1.07
PTPN7-204ENST00000462815 FAM223BA6NKX1 122 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 FABP7O15540 132 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 ARL6IP5O75915 188 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 FCGR3AP08637 254 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 CLEC2LP0C7M8 214 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 GSTT2P0CG29 244 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 GSTT2BP0CG30 244 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 CALRP27797 417 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 DUTP33316 252 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 SDC2P34741 201 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 RPS19P39019 145 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 SERPINB10P48595 397 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 CLDN12P56749 244 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 RHOGP84095 191 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 EXOSC2Q13868 293 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 SPCS2Q15005 226 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 IDO2Q6ZQW0 420 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 NR2C2APQ86WQ0 139 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 FAM223AQ8IWN6 122 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 IL17DQ8TAD2 202 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 SNAPC3Q92966 411 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 PEMTQ9UBM1 199 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 RSL24D1Q9UHA3 163 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 AK6Q9Y3D8 172 aaKnown RBP8.38□□□□□ -1.07
PTPN7-204ENST00000462815 DNAH6Q9C0G6 4158 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
PTPN7-204ENST00000462815 IGKV1D-8A0A087WSZ0 117 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TMEM272A0A1B0GTI8 110 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 A0A1B0GW64 132 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 C2orf70A6NJV1 201 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TEX22C9J3V5 150 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 MFNGO00587 321 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 SHOXO15266 292 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TPPPO94811 219 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 KIR2DS2P43631 304 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TAGLNQ01995 201 aaKnown RBP8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TATDN3Q17R31 274 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 KLK9Q2XQG4 91 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 C10orf55Q5SWW7 151 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 C19orf35Q6ZS72 473 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TPRA1Q86W33 373 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 TTC9CQ8N5M4 171 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 ZNF430Q9H8G1 570 aaPredicted RBP8.37□□□□□ -1.07
PTPN7-204ENST00000462815 SRD5A3Q9H8P0 318 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 KLK9Q9UKQ9 250 aa8.37□□□□□ -1.07
PTPN7-204ENST00000462815 CCDC160A6NGH7 325 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 OR11H12B2RN74 326 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 PPP5D1E7EU14 171 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 LGALS9O00182 355 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 BET1O15155 118 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 IGLV2-14P01704 120 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 HLA-AP01891 365 aaKnown RBP8.36□□□□□ -1.07
PTPN7-204ENST00000462815 SAA1P0DJI8 122 aaPredicted RBP8.36□□□□□ -1.07
PTPN7-204ENST00000462815 RRASP10301 218 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 FOLR2P14207 255 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.07
PTPN7-204ENST00000462815 RAB11BQ15907 218 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 TNXAQ16473 311 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 C2orf76Q3KRA6 126 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 Q6ZS49 121 aa8.36□□□□□ -1.07
PTPN7-204ENST00000462815 H1FOOQ8IZA3 346 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms