RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 SRSF8Q9BRL6 282 aaKnown RBP6.1□□□□□ -1.43
LSG1-205ENST00000461343 RNF126Q9BV68 326 aa6.1□□□□□ -1.43
LSG1-205ENST00000461343 ZNF471Q9BX82 626 aaPredicted RBP6.1□□□□□ -1.43
LSG1-205ENST00000461343 PARP12Q9H0J9 701 aaKnown RBP6.1□□□□□ -1.43
LSG1-205ENST00000461343 KCNIP2Q9NS61 270 aa6.1□□□□□ -1.43
LSG1-205ENST00000461343 FOXA2Q9Y261 457 aaPredicted RBP6.1□□□□□ -1.43
LSG1-205ENST00000461343 KMT2BQ9UMN6 2715 aaPredicted RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 C15orf61A6NNL5 157 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CEBPZOSA8MTT3 80 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 VWC2LB2RUY7 222 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 G3V3Q6 166 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 H0YJW9 148 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CHST1O43916 411 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 RAMP3O60896 148 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 TOX4O94842 621 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 IGKV1-5P01602 117 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 ARG1P05089 322 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 P0C879 139 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CT45A6P0DMU7 189 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CT45A5P0DMU8 189 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CT45A7P0DMV0 189 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 G6PCP35575 357 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 SULT1A1P50225 295 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 SUB1P53999 127 aaKnown RBP eCLIP6.09□□□□□ -1.43
LSG1-205ENST00000461343 DVL1P1P54792 670 aaPredicted RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 RPL30P62888 115 aaKnown RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 LAMTOR1Q6IAA8 161 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 BAP18Q8IXM2 172 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 ODF3L1Q8IXM7 274 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 STPG2Q8N412 459 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 TEX45Q8NA69 505 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 UBAC2Q8NBM4 344 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 DTD1Q8TEA8 209 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 ST6GALNAC6Q969X2 333 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 MALSU1Q96EH3 234 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 CYYR1Q96J86 154 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 HARBI1Q96MB7 349 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 ZNF251Q9BRH9 671 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 GGACTQ9BVM4 153 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 COMMD5Q9GZQ3 224 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 MS4A7Q9GZW8 240 aaPredicted RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 SLC25A32Q9H2D1 315 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 TMEM140Q9NV12 185 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 PRR13Q9NZ81 148 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 C1RLQ9NZP8 487 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 KIAA1456Q9P272 454 aa6.09□□□□□ -1.43
LSG1-205ENST00000461343 RCL1Q9Y2P8 373 aaKnown RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 STRAPQ9Y3F4 350 aaKnown RBP6.09□□□□□ -1.43
LSG1-205ENST00000461343 CHD6Q8TD26 2715 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 YLPM1P49750 1951 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 ARID1AO14497 2285 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 A1L4Q6 167 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 RNF222A6NCQ9 220 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 MPTX1A8MV57 137 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 KIAA1324LA8MWY0 1029 aaPredicted RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 NUDT19A8MXV4 375 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 C22orf46C9J442 243 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 UMAD1C9J7I0 102 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 TEX46H3BTG2 121 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 SLC31A2O15432 143 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 MPDU1O75352 247 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 LY6HO94772 140 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 FAM106CPP0CH98 169 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 HKR1P10072 659 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 CXCL2P19875 107 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 HOXA1P49639 335 aaPredicted RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 RAB2AP61019 212 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 HSPE1P61604 102 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 LMO4P61968 165 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 RPS16P62249 146 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 ARF6P62330 175 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 POLR2GP62487 172 aaKnown RBP eCLIP6.08□□□□□ -1.44
LSG1-205ENST00000461343 RPL8P62917 257 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 ERHP84090 104 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 CLEC12BQ2HXU8 276 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 DEFB113Q30KQ7 82 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 OR2B11Q5JQS5 317 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 TPTE2P1Q5T6R2 138 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 SLC25A24Q6NUK1 477 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 MMD2Q8IY49 270 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 PNKDQ8N490 385 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 C11orf42Q8N5U0 333 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 ZNF383Q8NA42 475 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 ZNF680Q8NEM1 530 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 OR10P1Q8NGE3 313 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 OR1L6Q8NGR2 347 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 OR1L8Q8NGR8 309 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 SCGB1C1Q8TD33 95 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 RNF141Q8WVD5 230 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 ST8SIA2Q92186 375 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 LEAP2Q969E1 77 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 PERPQ96FX8 193 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 NABP2Q9BQ15 211 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 MRPL20Q9BYC9 149 aaKnown RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 PARD6GQ9BYG4 376 aaPredicted RBP6.08□□□□□ -1.44
LSG1-205ENST00000461343 PLEKHA3Q9HB20 300 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 TMEM14BQ9NUH8 114 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 PSENENQ9NZ42 101 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 OR5AC2Q9NZP5 309 aa6.08□□□□□ -1.44
LSG1-205ENST00000461343 SMG1Q96Q15 3661 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms