RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 RBMXL2O75526 392 aaKnown RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 DLX1P56177 255 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 DIAPH2-AS1Q14236 149 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 CLLU1Q5K131 121 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 RPL7L1Q6DKI1 246 aaKnown RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 CLEC9AQ6UXN8 241 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 OR4A16Q8NH70 328 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 OSR1Q8TAX0 266 aaPredicted RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 FAM168AQ92567 244 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 BSCL2Q96G97 398 aaPredicted RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 RBKSQ9H477 322 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 VPS13CQ709C8 3753 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 TXNL1O43396 289 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 PRTN3P24158 256 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 ATP5J2P56134 94 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 RELBQ01201 579 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 MARVELD3Q96A59 401 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 PIMREGQ9BSJ6 248 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 SMIM3Q9BZL3 60 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 AMMECR1Q9Y4X0 333 aaPredicted RBP11.58□□□□□ -0.56
USP39-207ENST00000450066 CELSR2Q9HCU4 2923 aa11.58□□□□□ -0.56
USP39-207ENST00000450066 H7C2Y5 167 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 IAPPP10997 89 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 PAX1P15863 534 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 COX7A1P24310 79 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 MC5RP33032 325 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 PAX2Q02962 417 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 PDPNQ86YL7 162 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 PNKDQ8N490 385 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 UBAC2Q8NBM4 344 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 OR11H6Q8NGC7 330 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 OR4P4Q8NGL7 312 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 OR52E5Q8NH55 327 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 C10orf105Q8TEF2 133 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 LHX4Q969G2 390 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 QTRT1Q9BXR0 403 aaKnown RBP11.57□□□□□ -0.56
USP39-207ENST00000450066 PSENENQ9NZ42 101 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 SPG11Q96JI7 2443 aa11.57□□□□□ -0.56
USP39-207ENST00000450066 RAB13P51153 203 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 PRB3Q04118 309 aaPredicted RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 PDLIM3Q53GG5 364 aaPredicted RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 CLEC2AQ6UVW9 174 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 ZNF429Q86V71 674 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 STX12Q86Y82 276 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 OR4C13Q8NGP0 309 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 CIB3Q96Q77 187 aaPredicted RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 UNKLQ9H9P5 680 aaKnown RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 WFDC1Q9HC57 220 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 KPTNQ9Y664 436 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 FBN2P35556 2912 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 BORCS7-ASMTA0A0B4J1R7 106 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 H3BP45 60 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 CST7O76096 145 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 IL6RP08887 468 aaPredicted RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 SULT1A1P50225 295 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 OR2B8PP59922 312 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 SPCS3P61009 180 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 LCN2P80188 198 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 DTD1Q8TEA8 209 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 FLYWCH2Q96CP2 140 aaKnown RBP11.56□□□□□ -0.56
USP39-207ENST00000450066 SLC25A32Q9H2D1 315 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 SIRT7Q9NRC8 400 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 WASHC3Q9Y3C0 194 aa11.56□□□□□ -0.56
USP39-207ENST00000450066 TRAV3A0A0B4J244 114 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 IGHV2-70DA0A0C4DH43 119 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 C15orf61A6NNL5 157 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
USP39-207ENST00000450066 VWC2LB2RUY7 222 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 LY6LH3BQJ8 138 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 SHOXO15266 292 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 LY86O95711 162 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 PLA2G2AP14555 144 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 FOXA2Q9Y261 457 aaPredicted RBP11.55□□□□□ -0.56
USP39-207ENST00000450066 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 FOXH1O75593 365 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 IFNA17P01571 189 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 NMBP08949 121 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 EIF5AL1Q6IS14 154 aaKnown RBP11.55□□□□□ -0.56
USP39-207ENST00000450066 OR5C1Q8NGR4 320 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
USP39-207ENST00000450066 HARBI1Q96MB7 349 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 TMEM14BQ9NUH8 114 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 BET1LQ9NYM9 111 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 INSIG2Q9Y5U4 225 aa11.55□□□□□ -0.56
USP39-207ENST00000450066 ARHGAP32A7KAX9 2087 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 LINC00862A6NCI5 91 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 DYNLT3P51808 116 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 ZNF266Q14584 549 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 SPANXN5Q5MJ07 72 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 HCP5Q6MZN7 132 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 PUSL1Q8N0Z8 303 aaKnown RBP11.54□□□□□ -0.56
USP39-207ENST00000450066 TMEM217Q8N7C4 229 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 NRGNQ92686 78 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 ZDHHC16Q969W1 377 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 RPEQ96AT9 228 aa11.54□□□□□ -0.56
USP39-207ENST00000450066 RBMXL1Q96E39 390 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms