RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 MLF1P58340 268 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 HLA-DQA1Q5Y7H0 255 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 CCDC144NLQ6NUI1 221 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 SHISA2Q6UWI4 295 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 TSKUQ8WUA8 353 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 SPACA5Q96QH8 159 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 PMCHL2Q9BQD1 86 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 GEMIN7Q9H840 131 aaKnown RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 GP6Q9HCN6 339 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 THYN1Q9P016 225 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 JKAMPQ9P055 326 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 UBE2J1Q9Y385 318 aaPredicted RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 U3KQA8 63 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 A0A1W2PR80 420 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 FAM231BA6NCW3 169 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 GAGE12HA6NDE8 117 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 FRG2CA6NGY1 282 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 RBMXL2O75526 392 aaKnown RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 CFIP05156 583 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 CELA2AP08217 269 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 ZNF17P17021 662 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 IER3P46695 156 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 RPEL1Q2QD12 228 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 DCAF12Q5T6F0 453 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 WDR74Q6RFH5 385 aaPredicted RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 RPP25LQ8N5L8 163 aaKnown RBP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 TAF15Q92804 592 aaKnown RBP eCLIP6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 C10orf35Q96D05 121 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 CYYR1Q96J86 154 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 RCHY1Q96PM5 261 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 TXNIPQ9H3M7 391 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 OCIAD1Q9NX40 245 aa6.33□□□□□ -1.4
TRIM49C-201ENST00000448984 PHF3Q92576 2039 aaKnown RBP6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 FREM3P0C091 2139 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 FAM181BA6NEQ2 426 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 F2RL2O00254 374 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 LAMTOR5O43504 91 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 PAGE4O60829 102 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 HLA-DQA1P01909 254 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 CCL1P22362 96 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 NPY1RP25929 384 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 GNB1P62873 340 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 OR8B8Q15620 311 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 SGCBQ16585 318 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 LTC4SQ16873 150 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 TMEM249Q2WGJ8 235 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 FOXI2Q6ZQN5 318 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 FA2HQ7L5A8 372 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 RNF144BQ7Z419 303 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 SLC25A22Q9H936 323 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 HES4Q9HCC6 221 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 KCNIP1Q9NZI2 227 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 COL5A1P20908 1838 aaPredicted RBP6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 ZFHX4Q86UP3 3567 aa6.32□□□□□ -1.4
TRIM49C-201ENST00000448984 A6NDN8 102 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 C19orf67A6NJJ6 358 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ANKRD30BLA7E2S9 258 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ZNF207O43670 478 aaKnown RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 MT-ATP6P00846 226 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 IGKV1D-33P01593 117 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 IGKV1-33P01594 117 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 NPPCP23582 126 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 CA7P43166 264 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 Q56UQ5 140 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 LYSMD4Q5XG99 296 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 LCN12Q6JVE5 192 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 LINC00346Q8IVM7 164 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ZNF295-AS1Q8N0V1 137 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 OR2K2Q8NGT1 345 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 APOBEC3DQ96AK3 386 aaPredicted RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 Q96M66 194 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 MS4A6AQ9H2W1 248 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 COPS7AQ9UBW8 275 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 NAT8BQ9UHF3 227 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 COA3Q9Y2R0 106 aaPredicted RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 LY96Q9Y6Y9 160 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 CFAP47Q6ZTR5 3102 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 RTTNQ86VV8 2226 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 TRAV36DV7A0A075B6V5 113 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 TMED7-TICAM2A0A0A6YYA0 188 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 IGHV5-10-1A0A0J9YXX1 117 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 OR4C46A6NHA9 309 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 H3BML4 177 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 SCRG1O75711 98 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 PPOXP50336 477 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 SSBP2P81877 361 aaPredicted RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ARF1P84077 181 aaKnown RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ODF1Q14990 250 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 DOK3Q7L591 496 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 C6orf201Q7Z4U5 140 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 ZNF439Q8NDP4 499 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 OR5D13Q8NGL4 314 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 JMJD8Q96S16 334 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 HDHD3Q9BSH5 251 aaPredicted RBP6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 DUSP23Q9BVJ7 150 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 SCRT2Q9NQ03 307 aa6.31□□□□□ -1.4
TRIM49C-201ENST00000448984 MRPL16Q9NX20 251 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms