RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 OR2B11Q5JQS5 317 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 ZNF343Q6P1L6 599 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 SBSPONQ8IVN8 264 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 GVQW1Q8N7I0 195 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 OR6Q1Q8NGQ2 317 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 SRSF12Q8WXF0 261 aaKnown RBP15.88■□□□□ 0.13
SDC1-205ENST00000447124 ZNF430Q9H8G1 570 aaPredicted RBP15.88■□□□□ 0.13
SDC1-205ENST00000447124 COA4Q9NYJ1 87 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 ADAM30Q9UKF2 790 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 STAB2Q8WWQ8 2551 aa15.88■□□□□ 0.13
SDC1-205ENST00000447124 TRIM64CA6NLI5 447 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 ZP3P21754 424 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 AADACP22760 399 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 OVCH2Q7RTZ1 564 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 GPHA2Q96T91 129 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 PHB2Q99623 299 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 DCUN1D5Q9BTE7 237 aa15.87■□□□□ 0.13
SDC1-205ENST00000447124 SLC22A5O76082 557 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 IGLV1-51P01701 117 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 PRH1P02810 166 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 OR9G9P0C7N8 305 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 TGFBR1P36897 503 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 SCAND1P57086 179 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 CDK10Q15131 360 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 KCTD21Q4G0X4 260 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 C10orf55Q5SWW7 151 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 KCTD9Q7L273 389 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 VKORC1L1Q8N0U8 176 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 MFSD4AQ8N468 514 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 ACOT12Q8WYK0 555 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 USMG5Q96IX5 58 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 ELOVL1Q9BW60 279 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 PEF1Q9UBV8 284 aaKnown RBP15.86■□□□□ 0.13
SDC1-205ENST00000447124 ETV7Q9Y603 341 aa15.86■□□□□ 0.13
SDC1-205ENST00000447124 DNAH7Q8WXX0 4024 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 ZNF45Q02386 682 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 HOGA1Q86XE5 327 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 Q8N1Y9 231 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 BEST4Q8NFU0 473 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 AUNIPQ9H7T9 357 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 SPATA2Q9UM82 520 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 PRELID3BQ9Y3B1 194 aa15.85■□□□□ 0.13
SDC1-205ENST00000447124 E7EUB6 86 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 FCER2P06734 321 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 FCGR2CP31995 323 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 SYNJ2BPP57105 145 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 MMD2Q8IY49 270 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 TTC9CQ8N5M4 171 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 HSD17B10Q99714 261 aaKnown RBP15.84■□□□□ 0.13
SDC1-205ENST00000447124 AKIP1Q9NQ31 210 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 CCL28Q9NRJ3 127 aa15.84■□□□□ 0.13
SDC1-205ENST00000447124 TRBV9A0A0B4J1U6 114 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 HMX3A6NHT5 357 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 FRMD6-AS1P0C7T7 363 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 PUSL1Q8N0Z8 303 aaKnown RBP15.83■□□□□ 0.12
SDC1-205ENST00000447124 OR9G4Q8NGQ1 327 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 TCTEX1D2Q8WW35 142 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 RSRP1Q9BUV0 290 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 TAS2R8Q9NYW2 309 aa15.83■□□□□ 0.12
SDC1-205ENST00000447124 A0A0A6YYH2 397 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 A0A1B0GW64 132 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 A6NJ64 397 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 MPPED1O15442 326 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 OR2A4O95047 310 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 CSN3P07498 182 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 IL6RP08887 468 aaPredicted RBP15.82■□□□□ 0.12
SDC1-205ENST00000447124 RHOGP84095 191 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 ANKRD13BQ86YJ7 626 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 OR2A7Q96R45 310 aa15.82■□□□□ 0.12
SDC1-205ENST00000447124 MRPS7Q9Y2R9 242 aaKnown RBP15.82■□□□□ 0.12
SDC1-205ENST00000447124 TEX22C9J3V5 150 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 ACTL6BO94805 426 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 RPS19P39019 145 aaKnown RBP15.81■□□□□ 0.12
SDC1-205ENST00000447124 ZNF66Q6ZN08 573 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 C19orf35Q6ZS72 473 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 OR4S2Q8NH73 311 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 TMEM167AQ8TBQ9 72 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 SECTM1Q8WVN6 248 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 SNAPC3Q92966 411 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 YIPF6Q96EC8 236 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 SPIN2AQ99865 258 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 SPIN2BQ9BPZ2 258 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 DIABLOQ9NR28 239 aa15.81■□□□□ 0.12
SDC1-205ENST00000447124 TNFSF12O43508 249 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 MYOD1P15172 320 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 ARPC4P59998 168 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 ATP5G2Q06055 141 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 OR13F1Q8NGS4 319 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 DMRT1Q9Y5R6 373 aa15.8■□□□□ 0.12
SDC1-205ENST00000447124 MEIS3P1A6NDR6 274 aa15.79■□□□□ 0.12
SDC1-205ENST00000447124 BMPR1BO00238 502 aa15.79■□□□□ 0.12
SDC1-205ENST00000447124 KBTBD11O94819 623 aa15.79■□□□□ 0.12
SDC1-205ENST00000447124 PPYP01298 95 aa15.79■□□□□ 0.12
SDC1-205ENST00000447124 MECP2P51608 486 aaKnown RBP15.79■□□□□ 0.12
SDC1-205ENST00000447124 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP15.78■□□□□ 0.12
SDC1-205ENST00000447124 FAM223BA6NKX1 122 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 XRCC3O43542 346 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 CREBL2O60519 120 aaPredicted RBP15.78■□□□□ 0.12
SDC1-205ENST00000447124 OR2J3O76001 311 aa15.78■□□□□ 0.12
SDC1-205ENST00000447124 LSM3P62310 102 aaKnown RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms