RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 SERF2P84101 59 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 MIC13Q5XKP0 118 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 VWA1Q6PCB0 445 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 TMEM14EPQ6UXP3 125 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 GNG12Q9UBI6 72 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 TSTD3H0UI37 97 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 AQP7O14520 342 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 TIMM8AO60220 97 aaPredicted RBP10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 ACTL6BO94805 426 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 SLC35B1P78383 322 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 PNRC1Q12796 327 aaPredicted RBP10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 SNIP1Q8TAD8 396 aaKnown RBP10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 MED13LQ71F56 2210 aa10.95□□□□□ -0.66
SLC48A1-201ENST00000442218 TRGV5A0A0B4J1U4 118 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 MARCH11A6NNE9 402 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 RRHO14718 337 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 NUBP1P53384 320 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 RNPS1Q15287 305 aaKnown RBP10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 CYP2G1PQ6ZSU1 146 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 ZNF645Q8N7E2 425 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 ZNRF1Q8ND25 227 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 PSMG3Q9BT73 122 aaPredicted RBP10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 ZNRD1Q9P1U0 126 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 TET2Q6N021 2002 aaPredicted RBP10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 NAV3Q8IVL0 2385 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 B4DEV8 164 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 SCGB1D1O95968 90 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 CDC34P49427 236 aaPredicted RBP10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 FOXF2Q12947 444 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 SPATA31B1PQ5VZV4 182 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 ABI3Q9P2A4 366 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 PITPNC1Q9UKF7 332 aa10.94□□□□□ -0.66
SLC48A1-201ENST00000442218 CTXND1A0A1B0GTU2 59 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 SLC17A3O00476 420 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 DVL1O14640 695 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 G0S2P27469 103 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 GNB1P62873 340 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 DPPA3Q6W0C5 159 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 TMEM183AQ8IXX5 376 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 TMEM147Q9BVK8 224 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 HEYLQ9NQ87 328 aaPredicted RBP10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 POLDIP2Q9Y2S7 368 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 TANC2Q9HCD6 1990 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 TRBV24-1A0A075B6N3 115 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 TMEM30CPA0ZSE6 113 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 ZNF766Q5HY98 468 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 DEFB108BQ8NET1 73 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 OR2T10Q8NGZ9 312 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 PKIBQ9C010 78 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 ACTR3CQ9C0K3 210 aaPredicted RBP10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 GP6Q9HCN6 339 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 CBLN4Q9NTU7 201 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 HSPB7Q9UBY9 170 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 A0A1W2PPV4 95 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 M0R1X1 148 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 RBFOX2O43251 390 aaKnown RBP eCLIP10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 COX5AP20674 150 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 ERVK11-1P61568 191 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 PRAMEF5Q5TYX0 476 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 DUX4L9Q6RFH8 374 aaPredicted RBP10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 FDCSPQ8NFU4 85 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 PINX1Q96BK5 328 aaKnown RBP10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 SRD5A3Q9H8P0 318 aa10.93□□□□□ -0.66
SLC48A1-201ENST00000442218 ELOA3CA0A087WX78 387 aaPredicted RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 SCO2A0A1W2PP80 73 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 ARL14EPLP0DKL9 152 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 COX5BP10606 129 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 GATA2P23769 480 aaPredicted RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 CD82P27701 267 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 MSMO1Q15800 293 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 SRSF7Q16629 238 aaKnown RBP eCLIP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 MOB3BQ86TA1 216 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 OR2Z1Q8NG97 314 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 R3HDM4Q96D70 268 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 PMS2P5A8MQ11 134 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 EREGO14944 169 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 GATCO43716 136 aaKnown RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 PROP1O75360 226 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 PRB4P10163 310 aaPredicted RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 IL3RAP26951 378 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 GCH1P30793 250 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 NEIL1Q96FI4 390 aaPredicted RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 LRFN3Q9BTN0 628 aa10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 MBNL3Q9NUK0 354 aaKnown RBP10.92□□□□□ -0.66
SLC48A1-201ENST00000442218 IGF2RP11717 2491 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 TRBV20OR9-2A0A075B6H5 130 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 FOXH1O75593 365 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 HRASP01112 189 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 PKIAP61925 76 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 SSX2Q16385 188 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 NRN1LQ496H8 165 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 TGIF2LXQ8IUE1 241 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 C11orf53Q8IXP5 236 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 LRRC29Q8WV35 223 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 NANOS1Q8WY41 292 aaKnown RBP10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 ASCL3Q9NQ33 180 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 ABCA4P78363 2273 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 TRBV6-6A0A0A6YYG2 114 aa10.91□□□□□ -0.66
SLC48A1-201ENST00000442218 C15orf62A8K5M9 175 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms