RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 SSX9Q7RTT3 188 aa22.53■■□□□ 1.2
CGREF1-207ENST00000440612 RHOVQ96L33 236 aa22.53■■□□□ 1.2
CGREF1-207ENST00000440612 TNFSF18Q9UNG2 199 aa22.53■■□□□ 1.2
CGREF1-207ENST00000440612 WASHC3Q9Y3C0 194 aa22.53■■□□□ 1.2
CGREF1-207ENST00000440612 POMT1Q9Y6A1 747 aa22.53■■□□□ 1.2
CGREF1-207ENST00000440612 IGHV3-72A0A0B4J1Y9 119 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 TRAV20A0A0B4J274 112 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 ARPC5O15511 151 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 NKX2-1P43699 371 aaPredicted RBP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 MINOS1Q5TGZ0 78 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 H2BFWTQ7Z2G1 175 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 FOXRED2Q8IWF2 684 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 DMBX1Q8NFW5 382 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 THAP6Q8TBB0 222 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 RITA1Q96K30 269 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 LSM5Q9Y4Y9 91 aaKnown RBP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 MINOS1-NBL1R4GNA1 71 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 ZANQ9Y493 2812 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 H7C2Y5 167 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 ST8SIA3O43173 380 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 KCNAB3O43448 404 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 CR1P17927 2039 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 PAX6P26367 422 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 MC5RP33032 325 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 PRRC2AP48634 2157 aaKnown RBP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 HABP2Q14520 560 aaPredicted RBP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 ZNF546Q86UE3 836 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 WFDC11Q8NEX6 87 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 OSR1Q8TAX0 266 aaPredicted RBP22.52■■□□□ 1.2
CGREF1-207ENST00000440612 CFHR4Q92496 578 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 TMEM140Q9NV12 185 aa22.52■■□□□ 1.2
CGREF1-207ENST00000440612 TRAV3A0A0B4J244 114 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 FAM90A9PA6NNJ1 464 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 NXPH3O95157 252 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 POLR2GP62487 172 aaKnown RBP eCLIP22.51■■□□□ 1.19
CGREF1-207ENST00000440612 AARDQ4LEZ3 155 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 OR4A47Q6IF82 309 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 PIP4P2Q8N4L2 257 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 HILPDAQ9Y5L2 63 aa22.51■■□□□ 1.19
CGREF1-207ENST00000440612 RNF222A6NCQ9 220 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 IGHV4-31P0DP07 118 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 CEACAM3P40198 252 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 MOB3BQ86TA1 216 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 OR4C13Q8NGP0 309 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 FLYWCH2Q96CP2 140 aaKnown RBP22.5■■□□□ 1.19
CGREF1-207ENST00000440612 MAGT1Q9H0U3 335 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 NSG2Q9Y328 171 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 TBL2Q9Y4P3 447 aaKnown RBP22.5■■□□□ 1.19
CGREF1-207ENST00000440612 HSPB11Q9Y547 144 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 AUP1Q9Y679 476 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 CCDC168Q8NDH2 2452 aa22.5■■□□□ 1.19
CGREF1-207ENST00000440612 TIMM23O14925 209 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 HRASP01112 189 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 AVPP01185 164 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 IGLV2-23P01705 113 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 RAB13P51153 203 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 RELBQ01201 579 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 TMEM249Q2WGJ8 235 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 FOXC2Q99958 501 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 PET100P0DJ07 73 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 GATA3P23771 443 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 ERVK-16P61578 105 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 OR8H3Q8N146 312 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 C7orf69Q9H7B7 122 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 CTNNBIP1Q9NSA3 81 aaPredicted RBP22.49■■□□□ 1.19
CGREF1-207ENST00000440612 ZFP57Q9NU63 452 aa22.49■■□□□ 1.19
CGREF1-207ENST00000440612 SHOXO15266 292 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 TMEM50AO95807 157 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 SAA4P35542 130 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 ARHGDIBP52566 201 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 SSX2Q16385 188 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 DCUN1D4Q92564 292 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 HARBI1Q96MB7 349 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 HSPB7Q9UBY9 170 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 AKAP9Q99996 3911 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 ITPR3Q14573 2671 aa22.48■■□□□ 1.19
CGREF1-207ENST00000440612 ZNF469Q96JG9 3925 aaPredicted RBP22.47■■□□□ 1.19
CGREF1-207ENST00000440612 MSGN1A6NI15 193 aa22.47■■□□□ 1.19
CGREF1-207ENST00000440612 OOSP1A8MZH6 123 aa22.47■■□□□ 1.19
CGREF1-207ENST00000440612 PUSL1Q8N0Z8 303 aaKnown RBP22.47■■□□□ 1.19
CGREF1-207ENST00000440612 MS4A7Q9GZW8 240 aaPredicted RBP22.47■■□□□ 1.19
CGREF1-207ENST00000440612 CREBBPQ92793 2442 aa22.47■■□□□ 1.19
CGREF1-207ENST00000440612 CELSR1Q9NYQ6 3014 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 NPFFO15130 113 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 SAA1P0DJI8 122 aaPredicted RBP22.46■■□□□ 1.19
CGREF1-207ENST00000440612 LGALS4P56470 323 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 MFFQ9GZY8 342 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 FAM90A26D6RGX4 464 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 PAX9P55771 341 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 FBLN7Q53RD9 439 aa22.46■■□□□ 1.19
CGREF1-207ENST00000440612 QTRT1Q9BXR0 403 aaKnown RBP22.46■■□□□ 1.19
CGREF1-207ENST00000440612 IGHV1-69DA0A0B4J2H0 117 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 CHST1O43916 411 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 VENTXO95231 258 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 IGHV1-69P01742 117 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 RLN2P04090 185 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 IGHV4-38-2P0DP08 117 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 OR2B8PP59922 312 aa22.45■■□□□ 1.18
CGREF1-207ENST00000440612 RPS16P62249 146 aaKnown RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms