RNA–Protein interactions for RNA: ENST00000439976.5

LAMB1-205, Transcript of laminin subunit beta 1, human

TSL 5

Gene LAMB1, Length 703 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LAMB1-205	ENST00000439976	NCS1	P62166	190 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	ZNF45	Q02386	682 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	TPRA1	Q86W33	373 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	FAM89B	Q8N5H3	189 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	HARBI1	Q96MB7	349 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	AKIP1	Q9NQ31	210 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	ZC4H2	Q9NQZ6	224 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	SLC2A8	Q9NY64	477 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	DMRT1	Q9Y5R6	373 aa		12.2	□□□□□ -0.46
LAMB1-205	ENST00000439976	TRBV9	A0A0B4J1U6	114 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	MSGN1	A6NI15	193 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	OR11H12	B2RN74	326 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	PDCD5	O14737	125 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	PRH1	P02810	166 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	SRM	P19623	302 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	SERPINB10	P48595	397 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	PSMD7	P51665	324 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	TMEM50B	P56557	158 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	RHOG	P84095	191 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	TMEM177	Q53S58	311 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	GLT8D1	Q68CQ7	371 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	DCSTAMP	Q9H295	470 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	SDHAF2	Q9NX18	166 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	MGAT4A	Q9UM21	535 aa		12.19	□□□□□ -0.46
LAMB1-205	ENST00000439976	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976		A0A0B4J203	849 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	BPNT1	O95861	308 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	CD3G	P09693	182 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	OR9G9	P0C7N8	305 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	RANBP1	P43487	201 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	KIR2DS2	P43631	304 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	EXOSC2	Q13868	293 aa	Known RBP	12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	CROCCP3	Q8IVE0	287 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	WDR89	Q96FK6	387 aa	Predicted RBP	12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	OVOL2	Q9BRP0	275 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	C12orf4	Q9NQ89	552 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	HSF4	Q9ULV5	492 aa		12.18	□□□□□ -0.46
LAMB1-205	ENST00000439976	C2orf70	A6NJV1	201 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	FAM223B	A6NKX1	122 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	LY6G6C	O95867	125 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	SDC2	P34741	201 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	EWSR1	Q01844	656 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	SPCS2	Q15005	226 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	PRSS8	Q16651	343 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	CNPY1	Q3B7I2	92 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	FAM223A	Q8IWN6	122 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	SRSF12	Q8WXF0	261 aa	Known RBP	12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	ARHGAP5-AS1	Q96IT6	56 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	GFI1	Q99684	422 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	OR2D2	Q9H210	308 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	RNF167	Q9H6Y7	350 aa		12.17	□□□□□ -0.46
LAMB1-205	ENST00000439976	TRDC	B7Z8K6	153 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	SHOX	O15266	292 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	TMEM127	O75204	238 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	FOLR2	P14207	255 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	RORC	P51449	518 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	PLAC9	Q5JTB6	97 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	IDO2	Q6ZQW0	420 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	OR6M1	Q8NGM8	313 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	DYNLRB2	Q8TF09	96 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	DDB2	Q92466	427 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	PHB2	Q99623	299 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	PECR	Q9BY49	303 aa		12.16	□□□□□ -0.46
LAMB1-205	ENST00000439976	HECTD4	Q9Y4D8	3996 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	PPP5D1	E7EU14	171 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	HLA-A	P01891	365 aa	Known RBP	12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	RAB3B	P20337	219 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	RPS19	P39019	145 aa	Known RBP	12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	UBE2K	P61086	200 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	ATP5G2	Q06055	141 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	P2RY14	Q15391	338 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	TNXA	Q16473	311 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	GUCA2B	Q16661	112 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	IGSF11	Q5DX21	431 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	TEX45	Q8NA69	505 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	OR4A4P	Q8NGN8	299 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	DYNC2LI1	Q8TCX1	351 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	SLC25A46	Q96AG3	418 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	CMSS1	Q9BQ75	279 aa	Known RBP	12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	DCUN1D5	Q9BTE7	237 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	CABLES2	Q9BTV7	478 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	ST6GALNAC5	Q9BVH7	336 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	PTTG2	Q9NZH5	202 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	CCDC59	Q9P031	241 aa	Known RBP	12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	SELENOK	Q9Y6D0	94 aa		12.15	□□□□□ -0.46
LAMB1-205	ENST00000439976	ZNF182	P17025	639 aa	Predicted RBP	12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	TGFBR1	P36897	503 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	TAGLN	Q01995	201 aa	Known RBP	12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	MXD1	Q05195	221 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	TTC9C	Q8N5M4	171 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	CACNG8	Q8WXS5	425 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	AP3S1	Q92572	193 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	KCTD12	Q96CX2	325 aa	Known RBP	12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	URM1	Q9BTM9	101 aa	Known RBP	12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	TECR	Q9NZ01	308 aa	Known RBP	12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	KCNK7	Q9Y2U2	307 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976		V9GY05	133 aa		12.14	□□□□□ -0.47
LAMB1-205	ENST00000439976	KIAA1109	Q2LD37	5005 aa		12.13	□□□□□ -0.47
LAMB1-205	ENST00000439976	TRBV6-7	A0A0A0MS04	114 aa		12.13	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 79 ms