RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 PEF1Q9UBV8 284 aaKnown RBP14.46□□□□□ -0.09
CCDC78-204ENST00000439619 NEDD8Q15843 81 aa14.45□□□□□ -0.1
CCDC78-204ENST00000439619 TIMM50Q3ZCQ8 353 aa14.45□□□□□ -0.1
CCDC78-204ENST00000439619 IDO2Q6ZQW0 420 aa14.45□□□□□ -0.1
CCDC78-204ENST00000439619 SLC25A42Q86VD7 318 aa14.45□□□□□ -0.1
CCDC78-204ENST00000439619 OR4S2Q8NH73 311 aa14.45□□□□□ -0.1
CCDC78-204ENST00000439619 TRAV18A0A075B6X5 111 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 SAA1P0DJI8 122 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-204ENST00000439619 APELAP0DMC3 54 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 KCTD21Q4G0X4 260 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 ZNF343Q6P1L6 599 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 OVCH2Q7RTZ1 564 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 CROCCP3Q8IVE0 287 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 BEST4Q8NFU0 473 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 TCTEX1D2Q8WW35 142 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 SNAPC3Q92966 411 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 AIFM2Q9BRQ8 373 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 ZNF430Q9H8G1 570 aaPredicted RBP14.44□□□□□ -0.1
CCDC78-204ENST00000439619 VCX3AQ9NNX9 186 aa14.44□□□□□ -0.1
CCDC78-204ENST00000439619 FAM223BA6NKX1 122 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 H0Y980 276 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 KLF5Q13887 457 aaPredicted RBP14.43□□□□□ -0.1
CCDC78-204ENST00000439619 RPEL1Q2QD12 228 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 OR2B11Q5JQS5 317 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 FAM209BQ5JX69 171 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 ZNF66Q6ZN08 573 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 FAM223AQ8IWN6 122 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 ADAD2Q8NCV1 583 aaKnown RBP14.43□□□□□ -0.1
CCDC78-204ENST00000439619 OR9G4Q8NGQ1 327 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 SPATA2Q9UM82 520 aa14.43□□□□□ -0.1
CCDC78-204ENST00000439619 DPPA5A6NC42 116 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 SSX5O60225 188 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 HRASP01112 189 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 IGLV1-51P01701 117 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 KIR2DS2P43631 304 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 ATP5G2Q06055 141 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 ZMAT4Q9H898 229 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 TAS2R8Q9NYW2 309 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 PEMTQ9UBM1 199 aa14.42□□□□□ -0.1
CCDC78-204ENST00000439619 OR2A4O95047 310 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 CLEC2LP0C7M8 214 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 MAS1LP35410 378 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 CBX5P45973 191 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 SYNJ2BPP57105 145 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 RHOGP84095 191 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 DYRK1AQ13627 763 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 MSMO1Q15800 293 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 SGPP2Q8IWX5 399 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 MFSD4AQ8N468 514 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 ZBTB34Q8NCN2 500 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 OR2A7Q96R45 310 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 TENM3Q9P273 2699 aa14.41□□□□□ -0.1
CCDC78-204ENST00000439619 IGKV1D-13A0A0B4J2D9 117 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 DHFRP00374 187 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 FRMD6-AS1P0C7T7 363 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 IGKV1-13P0DP09 117 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 FCGR2CP31995 323 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 RPL30P62888 115 aaKnown RBP14.4□□□□□ -0.1
CCDC78-204ENST00000439619 MRGPRG-AS1Q2M3A8 158 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 HOGA1Q86XE5 327 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 TTC9CQ8N5M4 171 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 NECAP1Q8NC96 275 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 OR13F1Q8NGS4 319 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 OR5H6Q8NGV6 325 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 SECTM1Q8WVN6 248 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 BORCS5Q969J3 196 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 SLC25A38Q96DW6 304 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 S100A16Q96FQ6 103 aaKnown RBP14.4□□□□□ -0.1
CCDC78-204ENST00000439619 RNF167Q9H6Y7 350 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 ZNF257Q9Y2Q1 563 aa14.4□□□□□ -0.1
CCDC78-204ENST00000439619 TRIM64CA6NLI5 447 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 AIREO43918 545 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 KBTBD11O94819 623 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 IGLV2-14P01704 120 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 CATR1Q13166 79 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 EXOSC2Q13868 293 aaKnown RBP14.39□□□□□ -0.11
CCDC78-204ENST00000439619 LCN12Q6JVE5 192 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 AUNIPQ9H7T9 357 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 AKIP1Q9NQ31 210 aa14.39□□□□□ -0.11
CCDC78-204ENST00000439619 PPYP01298 95 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 RPL27AP46776 148 aaKnown RBP14.38□□□□□ -0.11
CCDC78-204ENST00000439619 DEFA5Q01523 94 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 GTSCR1Q86UQ5 136 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 SBSPONQ8IVN8 264 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 VKORC1L1Q8N0U8 176 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 GVQW1Q8N7I0 195 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 TMEM167AQ8TBQ9 72 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 FYTTD1Q96QD9 318 aaKnown RBP14.38□□□□□ -0.11
CCDC78-204ENST00000439619 IFT46Q9NQC8 304 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 SIGLEC8Q9NYZ4 499 aa14.38□□□□□ -0.11
CCDC78-204ENST00000439619 TRBV9A0A0B4J1U6 114 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 C3orf84H3BNL1 204 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 PRH1P02810 166 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 C10orf55Q5SWW7 151 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 HAPLN4Q86UW8 402 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 Q8N402 240 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 OR4A5Q8NH83 315 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 KCTD12Q96CX2 325 aaKnown RBP14.37□□□□□ -0.11
CCDC78-204ENST00000439619 RCHY1Q96PM5 261 aa14.37□□□□□ -0.11
CCDC78-204ENST00000439619 SLC5A7Q9GZV3 580 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms