RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 FAM219AQ8IW50 185 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 LINC01356Q8N9X3 169 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 OR11H4Q8NGC9 324 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 RPEQ96AT9 228 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 R3HDM4Q96D70 268 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 RRNAD1Q96FB5 475 aaKnown RBP9.12□□□□□ -0.95
LINC00539-203ENST00000434601 NABP2Q9BQ15 211 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 GSKIPQ9P0R6 139 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 MMP24Q9Y5R2 645 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 ARHGAP32A7KAX9 2087 aa9.12□□□□□ -0.95
LINC00539-203ENST00000434601 TRAV20A0A0B4J274 112 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 A0A1B0GU03 582 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 LEUTXA8MZ59 168 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 LY6LH3BQJ8 138 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 MPC2O95563 127 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 CRYZL1O95825 349 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 SCGB1D2O95969 90 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 KRASP01116 189 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 GAPDHP04406 335 aaKnown RBP9.11□□□□□ -0.95
LINC00539-203ENST00000434601 P0C879 139 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 PET100P0DJ07 73 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 RRASP10301 218 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 PSMB6P28072 239 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 HTR1DP28221 377 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 G6PCP35575 357 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 CEACAM3P40198 252 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 RAB13P51153 203 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 S100A10P60903 97 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 ERVK-16P61578 105 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 SCGB2A2Q13296 93 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 RAB32Q13637 225 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 SMCO1Q147U7 214 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 TPTE2P1Q5T6R2 138 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 PDPNQ86YL7 162 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 OR5AN1Q8NGI8 311 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 OR4D5Q8NGN0 318 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 GRPEL2Q8TAA5 225 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
LINC00539-203ENST00000434601 FXYD6-FXYD2A0A087WZ82 144 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 MARCH11A6NNE9 402 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 H7C2Y5 167 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 SLC25A4P12235 298 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 NQO2P16083 231 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 IZUMO4Q1ZYL8 232 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 MINOS1Q5TGZ0 78 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 C11orf87Q6NUJ2 197 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 PDZD9Q8IXQ8 264 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 DMBX1Q8NFW5 382 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 OR1S1Q8NH92 325 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 LHX4Q969G2 390 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 DPM3Q9P2X0 92 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 MBD2Q9UBB5 411 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 CACNG5Q9UF02 275 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 TBL2Q9Y4P3 447 aaKnown RBP9.1□□□□□ -0.95
LINC00539-203ENST00000434601 MINOS1-NBL1R4GNA1 71 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 WNK2Q9Y3S1 2297 aa9.1□□□□□ -0.95
LINC00539-203ENST00000434601 TENM1Q9UKZ4 2725 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 IGHV1-3A0A0C4DH29 117 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 A0A1W2PPI3 338 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 A0A1W2PRD5 423 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 A0A1W2PRF3 423 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 A0A1W2PRM7 423 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 HMSDA8MTL9 139 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 K7EPK0 472 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 PITX3O75364 302 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 HRASP01112 189 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 MBPP02686 304 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-203ENST00000434601 IGKV1-16P04430 117 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 GATA3P23771 443 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 MC5RP33032 325 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 NKX2-1P43699 371 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-203ENST00000434601 UBE2E1P51965 193 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 LGALS4P56470 323 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 SRSF2Q01130 221 aaKnown RBP9.09□□□□□ -0.95
LINC00539-203ENST00000434601 POU2AF1Q16633 256 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 MIDNQ504T8 468 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 LDLRAD2Q5SZI1 272 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 PRSS54Q6PEW0 395 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 Q6ZRM9 215 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 OR8H3Q8N146 312 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 C9orf62Q8N4C0 152 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 FAM71E2Q8N5Q1 922 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 OSR1Q8TAX0 266 aaPredicted RBP9.09□□□□□ -0.95
LINC00539-203ENST00000434601 TMEM140Q9NV12 185 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 HIF1ANQ9NWT6 349 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 COA4Q9NYJ1 87 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
LINC00539-203ENST00000434601 POMT1Q9Y6A1 747 aa9.09□□□□□ -0.95
LINC00539-203ENST00000434601 FAM90A9PA6NNJ1 464 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 OOSP1A8MZH6 123 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 H0YIZ8 118 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 SHOXO15266 292 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 ARPC5O15511 151 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 ST8SIA3O43173 380 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 DEDDO75618 318 aa9.08□□□□□ -0.96
LINC00539-203ENST00000434601 LYL1P12980 280 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms