RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ACTR1BP42025 376 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 NUDT2P50583 147 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 STC1P52823 247 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 MYL6P60660 151 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 RPS11P62280 158 aaKnown RBP eCLIP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 FAM3AP98173 230 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 DEFA6Q01524 100 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 CASP8Q14790 479 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 MMDQ15546 238 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 LDLRAD2Q5SZI1 272 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 PDPK2PQ6A1A2 396 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 NIPAL1Q6NVV3 410 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 ADM2Q7Z4H4 148 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 DOLPP1Q86YN1 238 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 SGPP2Q8IWX5 399 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 MUC15Q8N387 334 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 C3orf56Q8N813 242 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 GATD1Q8NB37 220 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR5B17Q8NGF7 314 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 WFDC5Q8TCV5 224 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 IFT81Q8WYA0 676 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 DDIT4LQ96D03 193 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 MRAP2Q96G30 205 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 PYURFQ96I23 114 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF514Q96K75 400 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 PGLYRP3Q96LB9 341 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 TRNT1Q96Q11 434 aaKnown RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 RTBDNQ9BSG5 229 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 SHANK2-AS3Q9BTD1 123 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 FAAP24Q9BTP7 215 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 KRTAP4-4Q9BYR3 166 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR51E2Q9H255 320 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 TXNIPQ9H3M7 391 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 DSN1Q9H410 356 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 METTL17Q9H7H0 456 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 FBXL3Q9UKT7 428 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 C14orf166Q9Y224 244 aaKnown RBP1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 R4GN34 69 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 PKD1L1Q8TDX9 2849 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 NUMA1Q14980 2115 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 ANK1P16157 1881 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 SDK2Q58EX2 2172 aa1.58□□□□□ -2.16
HMGB1P27-201ENST00000431429 MAP1AP78559 2803 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 GOLGA8IPA6NC78 632 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR6C70A6NIJ9 312 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 TRPC5OSA6NMA1 111 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 C4orf51C9J302 202 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 F5H5P2 479 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 KLRC4-KLRK1H3BQV0 150 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 FGF16O43320 207 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 MPZL2O60487 215 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 POP7O75817 140 aaKnown RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 CBR3O75828 277 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 TNFAIP8O95379 198 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 HRES1P13985 223 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 PSMB9P28065 219 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 CA5AP35218 305 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 CRATP43155 626 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 FOXA1P55317 472 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 DCDP81605 110 aaKnown RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 FLI1Q01543 452 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 C22orf39Q6P5X5 142 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 FAM19A3Q7Z5A8 133 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 SPATA24Q86W54 205 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF680Q8NEM1 530 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 CCL4L1Q8NHW4 92 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 SLC37A2Q8TED4 501 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 TAPBPLQ9BX59 468 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 UGT2B28Q9BY64 529 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 ULBP1Q9BZM6 244 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR2D2Q9H210 308 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 WDR54Q9H977 334 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 C1orf109Q9NX04 203 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF443Q9Y2A4 671 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 OR51B4Q9Y5P0 310 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 PKDREJQ9NTG1 2253 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 TLN2Q9Y4G6 2542 aa1.57□□□□□ -2.16
HMGB1P27-201ENST00000431429 DCHS2Q6V1P9 2916 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF638Q14966 1978 aaKnown RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 ACANP16112 2415 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 TRAV8-2A0A0B4J237 113 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 ZNF729A6NN14 1252 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 E7EQ34 232 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 F8VZ95 297 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SMLR1H3BR10 107 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SULT1C2O00338 296 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 GPR171O14626 319 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 PHYHO14832 338 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 CALUO43852 315 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 STX10O60499 249 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 KLF7O75840 302 aaPredicted RBP1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 CDK14O94921 469 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 PDYNP01213 254 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGKV1D-33P01593 117 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 IGKV1-33P01594 117 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 TRGV3P03979 118 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SCGB1C2P0DMR2 95 aa1.56□□□□□ -2.16
HMGB1P27-201ENST00000431429 SPNP16150 400 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms