RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 MPPED1O15442 326 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 PLA2G10O15496 165 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 SLC25A17O43808 307 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 PEX14O75381 377 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 RLN1P04808 185 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 CTSDP07339 412 aaPredicted RBP9.79□□□□□ -0.84
USP40-205ENST00000430158 F2RP25116 425 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 BTCP35070 178 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 KIR2DS2P43631 304 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 PPP5CP53041 499 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 AP3S2P59780 193 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 UBE2KP61086 200 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 NDPQ00604 133 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 SRSF4Q08170 494 aaKnown RBP9.79□□□□□ -0.84
USP40-205ENST00000430158 PJVKQ0ZLH3 352 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 POU2AF1Q16633 256 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 SCGB2B2Q4G0G5 96 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 C19orf54Q5BKX5 351 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 LIN54Q6MZP7 749 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 IDO2Q6ZQW0 420 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 SPAG16Q8N0X2 631 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 PUSL1Q8N0Z8 303 aaKnown RBP9.79□□□□□ -0.84
USP40-205ENST00000430158 OR51H1Q8NH63 302 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 OR4S2Q8NH73 311 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 S100ZQ8WXG8 99 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 HARBI1Q96MB7 349 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 RASL11BQ9BPW5 248 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 FAM212BQ9NTI7 297 aaPredicted RBP9.79□□□□□ -0.84
USP40-205ENST00000430158 VSIG4Q9Y279 399 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 PKD1L1Q8TDX9 2849 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 NOTCH3Q9UM47 2321 aa9.79□□□□□ -0.84
USP40-205ENST00000430158 MGAM2Q2M2H8 2515 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 ARPC1BO15143 372 aaKnown RBP9.78□□□□□ -0.84
USP40-205ENST00000430158 SHOXO15266 292 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 IGKV1-39P01597 117 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 IGKV1D-39P04432 117 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 IGF1P05019 195 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 SAA1P0DJI8 122 aaPredicted RBP9.78□□□□□ -0.84
USP40-205ENST00000430158 CD40LGP29965 261 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CRIP2P52943 208 aaPredicted RBP9.78□□□□□ -0.84
USP40-205ENST00000430158 CX3CL1P78423 397 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CFHR3Q02985 330 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CATR1Q13166 79 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 TBC1D26Q86UD7 250 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CMTM1Q8IZ96 169 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 TCTEX1D1Q8N7M0 179 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 TEX45Q8NA69 505 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 ZFAND1Q8TCF1 268 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 TMEM230Q96A57 120 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 NOL4LQ96MY1 436 aaPredicted RBP9.78□□□□□ -0.84
USP40-205ENST00000430158 CITED1Q99966 193 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CCDC32Q9BV29 185 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 METTL1Q9UBP6 276 aaKnown RBP9.78□□□□□ -0.84
USP40-205ENST00000430158 SCP2D1Q9UJQ7 156 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 FBXO7Q9Y3I1 522 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 CMYA5Q8N3K9 4069 aa9.78□□□□□ -0.84
USP40-205ENST00000430158 S1PR2O95136 353 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 HPRT1P00492 218 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 PGAM2P15259 253 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 ECI1P42126 302 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 VDAC2P45880 294 aaPredicted RBP9.77□□□□□ -0.85
USP40-205ENST00000430158 PIGPP57054 158 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 IFITM3Q01628 133 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 TCTEX1D4Q5JR98 221 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 C9orf152Q5JTZ5 239 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 C10orf99Q6UWK7 81 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 ZNF562Q6V9R5 426 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 C12orf54Q6X4T0 127 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 SLC35E3Q7Z769 313 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 PPP1R27Q86WC6 154 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 VKORC1L1Q8N0U8 176 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 CADM3Q8N126 398 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 KLHDC1Q8N7A1 406 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 CD300LFQ8TDQ1 290 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 OR51J1Q9H342 316 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 PLEKHA2Q9HB19 425 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 MCUBQ9NWR8 336 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 KIAA1456Q9P272 454 aa9.77□□□□□ -0.85
USP40-205ENST00000430158 FAUP35544 74 aaKnown RBP9.76□□□□□ -0.85
USP40-205ENST00000430158 LPAR6P43657 344 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 TAS2R31P59538 309 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 CBX3Q13185 183 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 PRSS8Q16651 343 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 TRIQKQ629K1 86 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 ZNF57Q68EA5 555 aaPredicted RBP9.76□□□□□ -0.85
USP40-205ENST00000430158 STPG2Q8N412 459 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 ADAD2Q8NCV1 583 aaKnown RBP9.76□□□□□ -0.85
USP40-205ENST00000430158 TMEM167AQ8TBQ9 72 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 RHOVQ96L33 236 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 TP53RKQ96S44 253 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 COMMD9Q9P000 198 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 LINC00527Q9UJ94 153 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 NUBP2Q9Y5Y2 271 aa9.76□□□□□ -0.85
USP40-205ENST00000430158 TRAV3A0A0B4J244 114 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 A0A1B0GW64 132 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 NAP1L6A6NFF2 107 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 CRYM-AS1A6NIL9 109 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 H0Y980 276 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 AP4M1O00189 453 aa9.75□□□□□ -0.85
USP40-205ENST00000430158 ATP6V0E1O15342 81 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms