RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 FOXRED2Q8IWF2 684 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 CD300LFQ8TDQ1 290 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 NOL4LQ96MY1 436 aaPredicted RBP17.62■□□□□ 0.41
PTPN18-205ENST00000428843 LINC00527Q9UJ94 153 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 PLXNB1O43157 2135 aa17.62■□□□□ 0.41
PTPN18-205ENST00000428843 CTSDP07339 412 aaPredicted RBP17.61■□□□□ 0.41
PTPN18-205ENST00000428843 SAA1P0DJI8 122 aaPredicted RBP17.61■□□□□ 0.41
PTPN18-205ENST00000428843 F2RP25116 425 aa17.61■□□□□ 0.41
PTPN18-205ENST00000428843 PIGPP57054 158 aa17.61■□□□□ 0.41
PTPN18-205ENST00000428843 SURF2Q15527 256 aaPredicted RBP17.61■□□□□ 0.41
PTPN18-205ENST00000428843 TEX45Q8NA69 505 aa17.61■□□□□ 0.41
PTPN18-205ENST00000428843 AP4M1O00189 453 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 MPPED1O15442 326 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 HPRT1P00492 218 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 CA2P00918 260 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 CX3CL1P78423 397 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 CENPVQ7Z7K6 275 aaPredicted RBP17.6■□□□□ 0.41
PTPN18-205ENST00000428843 PPP1R27Q86WC6 154 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 VKORC1L1Q8N0U8 176 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 WIPF2Q8TF74 440 aaPredicted RBP17.6■□□□□ 0.41
PTPN18-205ENST00000428843 OR51J1Q9H342 316 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 GPR132Q9UNW8 380 aa17.6■□□□□ 0.41
PTPN18-205ENST00000428843 C14orf166Q9Y224 244 aaKnown RBP17.6■□□□□ 0.41
PTPN18-205ENST00000428843 LINC00854A0A1B0GVQ3 168 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 S1PR2O95136 353 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 HRASP01112 189 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 NDPQ00604 133 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 PJVKQ0ZLH3 352 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 MRGPRG-AS1Q2M3A8 158 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 ZNF585BQ52M93 769 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 STPG2Q8N412 459 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 TCTEX1D1Q8N7M0 179 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 CCDC71LQ8N9Z2 235 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 CHPT1Q8WUD6 406 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 CITED1Q99966 193 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 RTBDNQ9BSG5 229 aaPredicted RBP17.59■□□□□ 0.41
PTPN18-205ENST00000428843 CCDC32Q9BV29 185 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 PLEKHA2Q9HB19 425 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 PARP11Q9NR21 331 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 COPZ2Q9P299 210 aa17.59■□□□□ 0.41
PTPN18-205ENST00000428843 ATP6V0E1O15342 81 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 LPAR6P43657 344 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 TAS2R31P59538 309 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 SHISA2Q6UWI4 295 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 C10orf99Q6UWK7 81 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 ZNF562Q6V9R5 426 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 SSX9Q7RTT3 188 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 RHOVQ96L33 236 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 C5orf66Q9H5L9 145 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 COMMD9Q9P000 198 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 VSIG4Q9Y279 399 aa17.58■□□□□ 0.4
PTPN18-205ENST00000428843 STAB1Q9NY15 2570 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 PSMB11A5LHX3 300 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 IGF1P05019 195 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 ZNF846Q147U1 533 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 PUSL1Q8N0Z8 303 aaKnown RBP17.57■□□□□ 0.4
PTPN18-205ENST00000428843 C11orf44Q8N8P7 122 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 OR5AU1Q8NGC0 362 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 SCGB3A2Q96PL1 93 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 AIFM2Q9BRQ8 373 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 WDR12Q9GZL7 423 aaKnown RBP17.57■□□□□ 0.4
PTPN18-205ENST00000428843 FAM212BQ9NTI7 297 aaPredicted RBP17.57■□□□□ 0.4
PTPN18-205ENST00000428843 FBXO7Q9Y3I1 522 aa17.57■□□□□ 0.4
PTPN18-205ENST00000428843 TENM1Q9UKZ4 2725 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 ARPC1BO15143 372 aaKnown RBP17.56■□□□□ 0.4
PTPN18-205ENST00000428843 OR2A4O95047 310 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 NQO2P16083 231 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 CD40LGP29965 261 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 GNB1P62873 340 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 SSBP2P81877 361 aaPredicted RBP17.56■□□□□ 0.4
PTPN18-205ENST00000428843 PRSS8Q16651 343 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 HIST2H2BDQ6DRA6 164 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 ZNF329Q86UD4 541 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 VSTM2AQ8TAG5 236 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 OR2A7Q96R45 310 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 TP53RKQ96S44 253 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 ZNF580Q9UK33 172 aa17.56■□□□□ 0.4
PTPN18-205ENST00000428843 C3orf85A0A1B0GTC6 90 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 NAP1L6A6NFF2 107 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 H0Y980 276 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 KBTBD11O94819 623 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 CD28P10747 220 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 EGR2P11161 476 aaPredicted RBP17.55■□□□□ 0.4
PTPN18-205ENST00000428843 FXYD3Q14802 87 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 POU2AF1Q16633 256 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 TMEM167AQ8TBQ9 72 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 ABHD5Q8WTS1 349 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 R3HDM4Q96D70 268 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 ZNF430Q9H8G1 570 aaPredicted RBP17.55■□□□□ 0.4
PTPN18-205ENST00000428843 WSB1Q9Y6I7 421 aa17.55■□□□□ 0.4
PTPN18-205ENST00000428843 G3V318 75 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 FBXO24O75426 580 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 CNIH1O95406 144 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 RPA2P15927 270 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 VDAC1P21796 283 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 CRIP2P52943 208 aaPredicted RBP17.54■□□□□ 0.4
PTPN18-205ENST00000428843 TNXAQ16473 311 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 OR4A47Q6IF82 309 aa17.54■□□□□ 0.4
PTPN18-205ENST00000428843 ADAD2Q8NCV1 583 aaKnown RBP17.54■□□□□ 0.4
PTPN18-205ENST00000428843 DMBX1Q8NFW5 382 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms