RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 GATCO43716 136 aaKnown RBP11.97□□□□□ -0.49
ERCC3-202ENST00000426778 SELLP14151 372 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 CCL11P51671 97 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 NUBP1P53384 320 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 MIC13Q5XKP0 118 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 GNG12Q9UBI6 72 aa11.97□□□□□ -0.49
ERCC3-202ENST00000426778 PTPRBP23467 1997 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 AKAP13Q12802 2813 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 HRASP01112 189 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 GABRA6Q16445 453 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 ZNF664Q8N3J9 261 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 CD177Q8N6Q3 437 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 Q8TCH9 128 aa11.96□□□□□ -0.49
ERCC3-202ENST00000426778 NEIL1Q96FI4 390 aaPredicted RBP11.96□□□□□ -0.49
ERCC3-202ENST00000426778 IQCF6A8MYZ5 107 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 TSTD3H0UI37 97 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 NDUFB7P17568 137 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 CD82P27701 267 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 EIF4EBP1Q13541 118 aaPredicted RBP11.96□□□□□ -0.5
ERCC3-202ENST00000426778 HES3Q5TGS1 186 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 ZNRF1Q8ND25 227 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 OR2T10Q8NGZ9 312 aa11.96□□□□□ -0.5
ERCC3-202ENST00000426778 FAM90A26D6RGX4 464 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 AQP7O14520 342 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 CLDN14O95500 239 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 PRAMEF5Q5TYX0 476 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 VHLLQ6RSH7 139 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 Q8N7P7 452 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 LRRC29Q8WV35 223 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 FAM122AQ96E09 287 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 HEYLQ9NQ87 328 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-202ENST00000426778 PLXNB1O43157 2135 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 ZNF320A2RRD8 509 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 M0R1X1 148 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 NKX2-8O15522 239 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 CD1BP29016 333 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 USF2Q15853 346 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-202ENST00000426778 C1orf229Q6ZS94 237 aaPredicted RBP11.95□□□□□ -0.5
ERCC3-202ENST00000426778 OR2Z1Q8NG97 314 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 AGMATQ9BSE5 352 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 HINT2Q9BX68 163 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 DSCAMO60469 2012 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 RELNP78509 3460 aa11.95□□□□□ -0.5
ERCC3-202ENST00000426778 RBFOX2O43251 390 aaKnown RBP eCLIP11.94□□□□□ -0.5
ERCC3-202ENST00000426778 NUPR1O60356 82 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 OR4A8P0C604 315 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 ARL14EPLP0DKL9 152 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 CD59P13987 128 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 GPR12P47775 334 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 ZNF134P52741 427 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 PKIAP61925 76 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 SPATA31B1PQ5VZV4 182 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 MRPL41Q8IXM3 137 aaKnown RBP11.94□□□□□ -0.5
ERCC3-202ENST00000426778 TMEM256Q8N2U0 113 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 OR6C3Q9NZP0 311 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 TRBV20OR9-2A0A075B6H5 130 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 A0A1W2PPV4 95 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 GRIFINA4D1Z8 144 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 C21orf140B9A014 251 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 TMEM250H0YL14 139 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 CECR9P0C854 216 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 IL3RAP26951 378 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 MISP3Q96FF7 219 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 TIMM9Q9Y5J7 89 aa11.94□□□□□ -0.5
ERCC3-202ENST00000426778 SLC31A2O15432 143 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 WNT2P09544 360 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 HOXC12P31275 282 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 ASPHD1Q5U4P2 390 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 LINC01551Q86U37 167 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 GMPPAQ96IJ6 420 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 IMMP2LQ96T52 175 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 HES4Q9HCC6 221 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 SCO2A0A1W2PP80 73 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 CDX4O14627 284 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 FRMD6-AS1P0C7T7 363 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 MSMPQ1L6U9 139 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 SLC35E4Q6ICL7 350 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 C9orf106Q8NAJ2 232 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 MS4A5Q9H3V2 200 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 RAB29O14966 203 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 JOSD1Q15040 202 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 FAM214BQ7L5A3 538 aa11.93□□□□□ -0.5
ERCC3-202ENST00000426778 CENPVQ7Z7K6 275 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 OPN3Q9H1Y3 402 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-202ENST00000426778 NAV3Q8IVL0 2385 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 PIGBOS1A0A0B4J2F0 54 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 OR4A16Q8NH70 328 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 PYGO2Q9BRQ0 406 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 MANBALQ9NQG1 85 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 SVEP1Q4LDE5 3571 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 SLC17A3O00476 420 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 ACTL6BO94805 426 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 PRDX2P32119 198 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 DUTP33316 252 aaKnown RBP11.92□□□□□ -0.5
ERCC3-202ENST00000426778 ATP6V1FQ16864 119 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 ACOT6Q3I5F7 207 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-202ENST00000426778 TREML4Q6UXN2 200 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 WDR31Q8NA23 367 aa11.92□□□□□ -0.5
ERCC3-202ENST00000426778 FER1L6-AS2Q96M78 137 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms