RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 SPIN2BQ9BPZ2 258 aa17.3■□□□□ 0.36
ABCF3-202ENST00000421340 IL6RP08887 468 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-202ENST00000421340 HNF1AP20823 631 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 G6PCP35575 357 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 H2BFWTQ7Z2G1 175 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 GPR146Q96CH1 333 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 C2orf50Q96LR7 162 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 HARBI1Q96MB7 349 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 TSNAXQ99598 290 aaKnown RBP17.29■□□□□ 0.36
ABCF3-202ENST00000421340 ZNF436Q9C0F3 470 aaPredicted RBP17.29■□□□□ 0.36
ABCF3-202ENST00000421340 PRDM13Q9H4Q3 707 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 COA4Q9NYJ1 87 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 MYO9AB2RTY4 2548 aa17.29■□□□□ 0.36
ABCF3-202ENST00000421340 C5orf51A6NDU8 294 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 SRRM4A7MD48 611 aaKnown RBP17.28■□□□□ 0.36
ABCF3-202ENST00000421340 SNRNP70P08621 437 aaKnown RBP17.28■□□□□ 0.36
ABCF3-202ENST00000421340 H2BFSP57053 126 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 Q8N6K4 173 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 DMBX1Q8NFW5 382 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 RNASE11Q8TAA1 199 aaKnown RBP17.28■□□□□ 0.36
ABCF3-202ENST00000421340 VSTM2AQ8TAG5 236 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 EAF1Q96JC9 268 aaPredicted RBP17.28■□□□□ 0.36
ABCF3-202ENST00000421340 BET1LQ9NYM9 111 aa17.28■□□□□ 0.36
ABCF3-202ENST00000421340 C13orf42A0A1B0GVH6 325 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 SPDEFO95238 335 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 LY6G6DO95868 133 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 IGKV1D-33P01593 117 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 IGKV1-33P01594 117 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 IGLV2-23P01705 113 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 FGF2P09038 288 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 GIPP09681 153 aaPredicted RBP17.27■□□□□ 0.36
ABCF3-202ENST00000421340 UBE2KP61086 200 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 TUSC1Q2TAM9 212 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 LRRC75BQ2VPJ9 315 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 PUSL1Q8N0Z8 303 aaKnown RBP17.27■□□□□ 0.36
ABCF3-202ENST00000421340 TEX45Q8NA69 505 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 NPBQ8NG41 125 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 OR8H1Q8NGG4 311 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 OR4A5Q8NH83 315 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 OR10C1Q96KK4 312 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 NMES1Q9C002 83 aa17.27■□□□□ 0.36
ABCF3-202ENST00000421340 ABCA1O95477 2261 aa17.27■□□□□ 0.35
ABCF3-202ENST00000421340 A0A0G2JRQ6 117 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 FAM25EA8MYX2 175 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 CCSO14618 274 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 SIX6O95475 246 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 PAX6P26367 422 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 IL15RAQ13261 267 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 IAH1Q2TAA2 248 aaPredicted RBP17.26■□□□□ 0.35
ABCF3-202ENST00000421340 VMA21Q3ZAQ7 101 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 OR4A47Q6IF82 309 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 AKAP14Q86UN6 197 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 PIFOQ8TCI5 191 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 RITA1Q96K30 269 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 TMEM140Q9NV12 185 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 CACFD1Q9UGQ2 172 aa17.26■□□□□ 0.35
ABCF3-202ENST00000421340 FLNAP21333 2647 aaKnown RBP17.26■□□□□ 0.35
ABCF3-202ENST00000421340 MPTX1A8MV57 137 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 PITX3O75364 302 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 CCNKO75909 580 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 RAP2BP61225 183 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 SMCO1Q147U7 214 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 PSG5Q15238 335 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 DEFB112Q30KQ8 113 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 AARDQ4LEZ3 155 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 THOC7Q6I9Y2 204 aaKnown RBP17.25■□□□□ 0.35
ABCF3-202ENST00000421340 BCL6BQ8N143 479 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-202ENST00000421340 SSX3Q99909 188 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 NEURL2Q9BR09 285 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 PDCD10Q9BUL8 212 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 RANBP3Q9H6Z4 567 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-202ENST00000421340 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-202ENST00000421340 SOX21Q9Y651 276 aaPredicted RBP17.25■□□□□ 0.35
ABCF3-202ENST00000421340 OTOGQ6ZRI0 2925 aa17.25■□□□□ 0.35
ABCF3-202ENST00000421340 CRYGBP07316 175 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 SAA1P0DJI8 122 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-202ENST00000421340 SRP14P37108 136 aaKnown RBP17.24■□□□□ 0.35
ABCF3-202ENST00000421340 SCGB2A2Q13296 93 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 HES1Q14469 280 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 Q6ZRM9 215 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 SSX9Q7RTT3 188 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 FOXRED2Q8IWF2 684 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 VKORC1L1Q8N0U8 176 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 ZBTB8BQ8NAP8 495 aaPredicted RBP17.24■□□□□ 0.35
ABCF3-202ENST00000421340 TMEM167AQ8TBQ9 72 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 ST6GAL2Q96JF0 529 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 C1RLQ9NZP8 487 aa17.24■□□□□ 0.35
ABCF3-202ENST00000421340 UPK2O00526 184 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 NDUFA3O95167 84 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 TMEM11P17152 192 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 CD83Q01151 205 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 RELBQ01201 579 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 CLEC9AQ6UXN8 241 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 OR4D5Q8NGN0 318 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 FYTTD1Q96QD9 318 aaKnown RBP17.23■□□□□ 0.35
ABCF3-202ENST00000421340 SMR3AQ99954 134 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 ZFP57Q9NU63 452 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 CACNG5Q9UF02 275 aa17.23■□□□□ 0.35
ABCF3-202ENST00000421340 RRHO14718 337 aa17.22■□□□□ 0.35
ABCF3-202ENST00000421340 NBR2O15453 112 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms