RNA–Protein interactions for RNA: ENST00000397617.7

PTPRD-206, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-206ENST00000397617 IGHV1-46P01743 117 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 BPIFB3P59826 476 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 RPL31P62899 125 aaKnown RBP4.87□□□□□ -1.63
PTPRD-206ENST00000397617 H2BFWTQ7Z2G1 175 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 DYRK2Q92630 601 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 NIPSNAP3BQ9BS92 247 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 GSKIPQ9P0R6 139 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IGKV1D-17A0A075B6S4 117 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IGKV1D-13A0A0B4J2D9 117 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 NDUFS8O00217 210 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IGKV1-5P01602 117 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IGKV1-13P0DP09 117 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 OPRK1P41145 380 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 UBE2KP61086 200 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 DEFA6Q01524 100 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 TLE1Q04724 770 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF273Q14593 569 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 DNLZQ5SXM8 178 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 NCR3LG1Q68D85 454 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 RPL7L1Q6DKI1 246 aaKnown RBP4.87□□□□□ -1.63
PTPRD-206ENST00000397617 CYP2G1PQ6ZSU1 146 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM144Q7Z5S9 345 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 C1QL4Q86Z23 238 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF439Q8NDP4 499 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 COL25A1Q9BXS0 654 aaPredicted RBP4.87□□□□□ -1.63
PTPRD-206ENST00000397617 IFI27L2Q9H2X8 130 aa4.87□□□□□ -1.63
PTPRD-206ENST00000397617 DPRXA6NFQ7 191 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C15orf61A6NNL5 157 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 USF2Q15853 346 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF114Q8NC26 417 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 DNAJA3Q96EY1 480 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 SLC25A10Q9UBX3 287 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 KLF2Q9Y5W3 355 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 MAP1AP78559 2803 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 NKX2-6A6NCS4 301 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM178BH3BS89 294 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 M0QZK8 103 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 M0R036 132 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 GGCTO75223 188 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 RHBDL1O75783 438 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PRCDQ00LT1 54 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 KRBOX4Q5JUW0 171 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 NFYBP25208 207 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 CD1BP29016 333 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 RAB9AP51151 201 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 OR5C1Q8NGR4 320 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 OR10X1Q8NGY0 326 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 NPVFQ9HCQ7 196 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF230Q9UIE0 474 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 BMP5P22003 454 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 SSTR2P30874 369 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 FXYD4P59646 89 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TEX45Q8NA69 505 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TMEM106BQ9NUM4 274 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF705EA8MWA4 302 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 NDUFB3O43676 98 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 CEACAM6P40199 344 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 S100A10P60903 97 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 LCN2P80188 198 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 CLINT1Q14677 625 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C4orf17Q53FE4 359 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PHLDA2Q53GA4 152 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 CITED4Q96RK1 184 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 SORL1Q92673 2214 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 MSGN1A6NI15 193 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 F6UZH7 168 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TMPRSS2O15393 492 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 RPL29P47914 159 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PRRX1P54821 245 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PMP22Q01453 160 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 MEF2BQ02080 365 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 LY6G5BQ8NDX9 201 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 DTD1Q8TEA8 209 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TAF15Q92804 592 aaKnown RBP eCLIP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PATZ1Q9HBE1 687 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 IDI2-AS1Q9NZ38 188 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C1RLQ9NZP8 487 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 LSM4Q9Y4Z0 139 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 WDFY4Q6ZS81 3184 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C20orf202A1L168 122 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 ATP6V0CP27449 155 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 MADCAM1Q13477 382 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 TGIF2LYQ8IUE0 185 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 ZNF525Q8N782 197 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C15orf54Q8N8G6 183 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 NAXEQ8NCW5 288 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 C11orf52Q96A22 123 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 IMMP2LQ96T52 175 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 WDR61Q9GZS3 305 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 OR5AC2Q9NZP5 309 aa4.86□□□□□ -1.63
PTPRD-206ENST00000397617 MYEF2Q9P2K5 600 aaKnown RBP4.86□□□□□ -1.63
PTPRD-206ENST00000397617 PLATP00750 562 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 IGLV1-47P01700 117 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 BCL2P10415 239 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 GCSHP23434 173 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 VMA21Q3ZAQ7 101 aa4.85□□□□□ -1.63
PTPRD-206ENST00000397617 RELL2Q8NC24 303 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 SNRNP40Q96DI7 357 aaKnown RBP4.85□□□□□ -1.63
PTPRD-206ENST00000397617 DUSP13Q9UII6 198 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms