RNA–Protein interactions for RNA: ENST00000397108.8

FGFR1-208, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 2,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-208ENST00000397108 UBALD1Q8TB05 177 aa9.9□□□□□ -0.82
FGFR1-208ENST00000397108 DEPPQ9NTK1 212 aa9.9□□□□□ -0.82
FGFR1-208ENST00000397108 IL36RNQ9UBH0 155 aa9.9□□□□□ -0.82
FGFR1-208ENST00000397108 COX11Q9Y6N1 276 aa9.9□□□□□ -0.82
FGFR1-208ENST00000397108 NBASA2RRP1 2371 aa9.9□□□□□ -0.83
FGFR1-208ENST00000397108 IGKV1-6A0A0C4DH72 117 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 A8MXE2 369 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 HS3ST1O14792 307 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 P04436 131 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 F2RP25116 425 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 IER3P46695 156 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 FBLN7Q53RD9 439 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TMEM211Q6ICI0 200 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 ZNF738Q8NE65 137 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 OR2M7Q8NG81 312 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 SPSB1Q96BD6 273 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 PLSCR2Q9NRY7 297 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TBL2Q9Y4P3 447 aaKnown RBP9.89□□□□□ -0.83
FGFR1-208ENST00000397108 HELZ2Q9BYK8 2649 aaKnown RBP9.89□□□□□ -0.83
FGFR1-208ENST00000397108 A0A0G2JMM0 328 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 A0A1W2PPB8 328 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 A0A1W2PRS3 328 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 KIR3DP1A8MWS1 328 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 FCN1O00602 326 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 MLNRO43193 412 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 CLDN1O95832 211 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TMEM11P17152 192 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 KITLGP21583 273 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
FGFR1-208ENST00000397108 VAMP3Q15836 100 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 C1orf174Q8IYL3 243 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 SFRP2Q96HF1 295 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 FAM173AQ9BQD7 235 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 GCN1Q92616 2671 aaKnown RBP9.89□□□□□ -0.83
FGFR1-208ENST00000397108 CTXND1A0A1B0GTU2 59 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 LOC102725191A0A1B0GVB3 256 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 H0Y980 276 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 SIRPB1O00241 398 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 CBR3O75828 277 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 IGKV1-39P01597 117 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 IGKV1D-39P04432 117 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 CTRLP40313 264 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 AMTP48728 403 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TFF3Q07654 80 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 DAZAP2Q15038 168 aaPredicted RBP9.89□□□□□ -0.83
FGFR1-208ENST00000397108 KRTCAP3Q53RY4 240 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 GCSAMLQ5JQS6 135 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 LDLRAD2Q5SZI1 272 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 IL1F10Q8WWZ1 152 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TP73-AS1Q9UF72 201 aa9.89□□□□□ -0.83
FGFR1-208ENST00000397108 TRAV39A0A0B4J263 110 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 MDFIC2A0A1B0GVS7 189 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 VENTXO95231 258 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 CNN3Q15417 329 aaKnown RBP9.88□□□□□ -0.83
FGFR1-208ENST00000397108 PLCXD3Q63HM9 321 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 CLEC2AQ6UVW9 174 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 FAM19A2Q8N3H0 131 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 RNF2Q99496 336 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 ZNF586Q9NXT0 402 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 PPP1R3CQ9UQK1 317 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 SVILO95425 2214 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 DIDO1Q9BTC0 2240 aaKnown RBP9.88□□□□□ -0.83
FGFR1-208ENST00000397108 PINLYPA6NC86 204 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 CTSSP25774 331 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 TGFBR3Q03167 851 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 FOXL1Q12952 345 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 RNFT1Q5M7Z0 435 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 LCN12Q6JVE5 192 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 PROK2Q9HC23 129 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 NRN1Q9NPD7 142 aa9.88□□□□□ -0.83
FGFR1-208ENST00000397108 FASNP49327 2511 aaKnown RBP9.88□□□□□ -0.83
FGFR1-208ENST00000397108 ZNF407Q9C0G0 2248 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 TRBV20OR9-2A0A075B6H5 130 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 F6UZH7 168 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 G3V3Y1 287 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 KRASP01116 189 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 COL8A2P25067 703 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 YPEL3P61236 119 aaPredicted RBP9.87□□□□□ -0.83
FGFR1-208ENST00000397108 SLC35B1P78383 322 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 HLA-DRB5Q30154 266 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 ZGRF1Q86YA3 2104 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 ZNF611Q8N823 705 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 OXGR1Q96P68 337 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 GNB4Q9HAV0 340 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 TENM4Q6N022 2769 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 TRAV38-1A0A0B4J264 116 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 OR6C6A6NF89 314 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 SNURFLB1AK76 121 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 IGKV1-5P01602 117 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 GPX1P07203 203 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 PRAMEF20Q5VT98 475 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 LHFPL2Q6ZUX7 228 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 SPTSSAQ969W0 71 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 RCHY1Q96PM5 261 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 RP1L1Q8IWN7 2480 aaPredicted RBP9.87□□□□□ -0.83
FGFR1-208ENST00000397108 NCKAP5O14513 1909 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 MYO18BQ8IUG5 2567 aa9.87□□□□□ -0.83
FGFR1-208ENST00000397108 GNLYP22749 145 aa9.86□□□□□ -0.83
FGFR1-208ENST00000397108 UQCRFS1P47985 274 aa9.86□□□□□ -0.83
FGFR1-208ENST00000397108 OR8B8Q15620 311 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms