RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 PHB2Q99623 299 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 THAP7Q9BT49 309 aaPredicted RBP13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 OR2W1Q9Y3N9 320 aa13.9□□□□□ -0.18
PDLIM7-205ENST00000393551 DNAH1Q9P2D7 4330 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 FCGR3BO75015 233 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 CSN3P07498 182 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 OR9G9P0C7N8 305 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 AADACP22760 399 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 ARL6IP1Q15041 203 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 MUC7Q8TAX7 377 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 LGALS14Q8TCE9 139 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 USMG5Q96IX5 58 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 TM2D3Q9BRN9 247 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 CENPOQ9BU64 300 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 OR51E2Q9H255 320 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 DCSTAMPQ9H295 470 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 AKIP1Q9NQ31 210 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 DAPK2Q9UIK4 370 aa13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 RBMX2Q9Y388 322 aaKnown RBP13.89□□□□□ -0.19
PDLIM7-205ENST00000393551 TRBV9A0A0B4J1U6 114 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 A8MZ25 164 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 CDK10Q15131 360 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 OR2B11Q5JQS5 317 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 CASC10Q5T4H9 136 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 SFXN4Q6P4A7 337 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 TPRA1Q86W33 373 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 VKORC1L1Q8N0U8 176 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 ACOT12Q8WYK0 555 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 RNF167Q9H6Y7 350 aa13.88□□□□□ -0.19
PDLIM7-205ENST00000393551 IZUMO1RA6ND01 250 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 E7EUB6 86 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 TUSC2O75896 110 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 CTXN2P0C2S0 81 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 CLEC2LP0C7M8 214 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 SDC2P34741 201 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 MECP2P51608 486 aaKnown RBP13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 RHOGP84095 191 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 CNIH2Q6PI25 160 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 ADAMTSL5Q6ZMM2 481 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 KCTD9Q7L273 389 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 OR5H6Q8NGV6 325 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 GPHA2Q96T91 129 aa13.87□□□□□ -0.19
PDLIM7-205ENST00000393551 A0A1B0GW64 132 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 BMPR1BO00238 502 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 PTHLHP12272 177 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 C19orf35Q6ZS72 473 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 TTC9CQ8N5M4 171 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 SLC25A38Q96DW6 304 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 SIGLEC8Q9NYZ4 499 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 ANXA10Q9UJ72 324 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 DMRT1Q9Y5R6 373 aa13.86□□□□□ -0.19
PDLIM7-205ENST00000393551 TEX22C9J3V5 150 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 GNG2P59768 71 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 MXD1Q05195 221 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 RPEL1Q2QD12 228 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 MMD2Q8IY49 270 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 FCGR1BQ92637 280 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 DCUN1D5Q9BTE7 237 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 SSR3Q9UNL2 185 aa13.85□□□□□ -0.19
PDLIM7-205ENST00000393551 HMX3A6NHT5 357 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 FAM223BA6NKX1 122 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 MPPED1O15442 326 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 OR2A4O95047 310 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 IL6RP08887 468 aaPredicted RBP13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 CD36P16671 472 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 EXOSC2Q13868 293 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 FAM223AQ8IWN6 122 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 PUSL1Q8N0Z8 303 aaKnown RBP13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 GVQW1Q8N7I0 195 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 SNAPC3Q92966 411 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 CITED4Q96RK1 184 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 SPIN2AQ99865 258 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 SPIN2BQ9BPZ2 258 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 ZMAT4Q9H898 229 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
PDLIM7-205ENST00000393551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 H0Y980 276 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 SCGNO76038 276 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 SLC22A5O76082 557 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 EDN2P20800 178 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 ZNF773Q6PK81 442 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 MFSD4AQ8N468 514 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 HSD17B10Q99714 261 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 YTHDF1Q9BYJ9 559 aaKnown RBP13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 TAS2R8Q9NYW2 309 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 PRELID3BQ9Y3B1 194 aa13.83□□□□□ -0.2
PDLIM7-205ENST00000393551 OR2J3O76001 311 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 ACTL6BO94805 426 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 KBTBD11O94819 623 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 MYOD1P15172 320 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 C15orf32Q32M92 178 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 SGPP2Q8IWX5 399 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 NECAP1Q8NC96 275 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 TMEM167AQ8TBQ9 72 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 TCTEX1D2Q8WW35 142 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 CCL28Q9NRJ3 127 aa13.82□□□□□ -0.2
PDLIM7-205ENST00000393551 MRPS7Q9Y2R9 242 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.1 ms