RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ASPHD1Q5U4P2 390 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 ZNF562Q6V9R5 426 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 SSX9Q7RTT3 188 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 OVCH2Q7RTZ1 564 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 MFSD4AQ8N468 514 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 RNF152Q8N8N0 203 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 MINDY2Q8NBR6 621 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR5T1Q8NG75 326 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 OR52I2Q8NH67 350 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 DYNC2LI1Q8TCX1 351 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 RAB2BQ8WUD1 216 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 GIMAP1Q8WWP7 306 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 ISOC1Q96CN7 298 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 ADTRPQ96IZ2 230 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 CMTM3Q96MX0 182 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 ABHD1Q96SE0 405 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 ZFP57Q9NU63 452 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 FOXA2Q9Y261 457 aaPredicted RBP5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 NUBP2Q9Y5Y2 271 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 CEPT1Q9Y6K0 416 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 NOTCH1P46531 2555 aa5.97□□□□□ -1.45
HMGB3P1-201ENST00000393368 WNK1Q9H4A3 2382 aa5.96□□□□□ -1.45
HMGB3P1-201ENST00000393368 CCDC160A6NGH7 325 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 CCL24O00175 119 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 NOL3O60936 208 aaKnown RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 IGHV3-11P01762 117 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 RLN1P04808 185 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 RPA2P15927 270 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 GNRHRP30968 328 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 HOXD3P31249 432 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 RCVRNP35243 200 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 CDX1P47902 265 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 LGALS7P47929 136 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 RAB9AP51151 201 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 CRIP2P52943 208 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMBIM6P55061 237 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 TAS2R46P59540 309 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 UBE2KP61086 200 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 DGCR2P98153 550 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 PRSS8Q16651 343 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 VMA21Q3ZAQ7 101 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 AADACL3Q5VUY0 350 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 TMEM65Q6PI78 240 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 C19orf35Q6ZS72 473 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 SPAG16Q8N0X2 631 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF491Q8N8L2 437 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR51H1Q8NH63 302 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR4S2Q8NH73 311 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 OSR1Q8TAX0 266 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 MYOZ3Q8TDC0 251 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 MOB3AQ96BX8 217 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 P2RX4Q99571 388 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 PHB2Q99623 299 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 HSD17B10Q99714 261 aaKnown RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 TINAGL1Q9GZM7 467 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 C6orf62Q9GZU0 229 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF430Q9H8G1 570 aaPredicted RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 SCPEP1Q9HB40 452 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF355PQ9NSJ1 428 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 CCDC59Q9P031 241 aaKnown RBP5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 KLK11Q9UBX7 282 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 SCOCQ9UIL1 159 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF580Q9UK33 172 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 PRELID3BQ9Y3B1 194 aa5.96□□□□□ -1.46
HMGB3P1-201ENST00000393368 MSGN1A6NI15 193 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 RBMXL2O75526 392 aaKnown RBP5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 SLC22A5O76082 557 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 S1PR2O95136 353 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 PRH1P02810 166 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 MYCNOSP40205 109 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 TPPP2P59282 170 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 TSPAN5P62079 268 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 PHLDA2Q53GA4 152 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 AKIRIN2Q53H80 203 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 FOXB2Q5VYV0 432 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 FAAP20Q6NZ36 180 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 DHRS11Q6UWP2 260 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 ZNF66Q6ZN08 573 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 LINC00528Q8N1L1 170 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 TEX45Q8NA69 505 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 WFDC9Q8NEX5 89 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR11H1Q8NG94 326 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 OR4D10Q8NGI6 311 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 C4orf3Q8WVX3 66 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 SRSF12Q8WXF0 261 aaKnown RBP5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 SLIRPQ9GZT3 109 aaKnown RBP5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 ADAM30Q9UKF2 790 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 VSIG4Q9Y279 399 aa5.95□□□□□ -1.46
HMGB3P1-201ENST00000393368 IGHV4OR15-8A0A075B7B6 117 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 A0A087WW49 117 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 TRAV3A0A0B4J244 114 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 A0A1B0GW64 132 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 HMX3A6NHT5 357 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 E7EUB6 86 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 I3L521 148 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 MPPED1O15442 326 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 PGLYRP1O75594 196 aaPredicted RBP5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 KBTBD11O94819 623 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 TRGV3P03979 118 aa5.94□□□□□ -1.46
HMGB3P1-201ENST00000393368 CD3DP04234 171 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms