RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 FGF7P21781 194 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 OR2B8PP59922 312 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 RNF212Q495C1 297 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 LCN15Q6UWW0 184 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 SSX9Q7RTT3 188 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 DMRTC2Q8IXT2 367 aaPredicted RBP11.75□□□□□ -0.53
MKS1-203ENST00000393120 LYG1Q8N1E2 194 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 GNG13Q9P2W3 67 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 FOXA2Q9Y261 457 aaPredicted RBP11.75□□□□□ -0.53
MKS1-203ENST00000393120 PPIAL4AQ9Y536 164 aa11.75□□□□□ -0.53
MKS1-203ENST00000393120 PTPRZ1P23471 2315 aaPredicted RBP11.75□□□□□ -0.53
MKS1-203ENST00000393120 A0A1W2PPE3 182 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 H3BQ15 152 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 MMP23AO75900 390 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 IGKV1D-33P01593 117 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 IGKV1-33P01594 117 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 CRYBA1P05813 215 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 NDUFB7P17568 137 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 EFNB3Q15768 340 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 SPINK9Q5DT21 86 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 ACSM6Q6P461 480 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 SSX7Q7RTT5 188 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 CYB561D1Q8N8Q1 229 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 ZCCHC14Q8WYQ9 949 aaKnown RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 RHOVQ96L33 236 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 NPCDR1Q9BY65 106 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 MS4A5Q9H3V2 200 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 SLC39A9Q9NUM3 307 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 TMEM106BQ9NUM4 274 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 WDR83OSQ9Y284 106 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 PUS1Q9Y606 427 aaKnown RBP eCLIP11.74□□□□□ -0.53
MKS1-203ENST00000393120 C15orf61A6NNL5 157 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 E7EQL1 145 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 C17orf112F2Z3M2 114 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 GFRA3O60609 400 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 NDUFS6O75380 124 aaKnown RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 HRASP01112 189 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 IFNA1P01562 189 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 IL6RP08887 468 aaPredicted RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 DAOP14920 347 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 AKR1C3P42330 323 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 ELLP55199 621 aaPredicted RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 CASP6P55212 293 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 RPL31P62899 125 aaKnown RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 FBXL19-AS1Q494R0 122 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 AKIRIN2Q53H80 203 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 HEPN1Q6WQI6 88 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 SLC35E3Q7Z769 313 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 VKORC1L1Q8N0U8 176 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 ZCCHC24Q8N2G6 241 aaKnown RBP11.74□□□□□ -0.53
MKS1-203ENST00000393120 ZNF709Q8N972 641 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 C20orf24Q9BUV8 137 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 TMEM14BQ9NUH8 114 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 VAX2Q9UIW0 290 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 CUL9Q8IWT3 2517 aa11.74□□□□□ -0.53
MKS1-203ENST00000393120 DYSFO75923 2080 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 DSPP15924 2871 aaKnown RBP11.73□□□□□ -0.53
MKS1-203ENST00000393120 A0A087WWC5 75 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 CTXND1A0A1B0GTU2 59 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 MPDU1O75352 247 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 CD1BP29016 333 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 MAS1LP35410 378 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 TAGLN2P37802 199 aaKnown RBP11.73□□□□□ -0.53
MKS1-203ENST00000393120 NHLH1Q02575 133 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 OR4A47Q6IF82 309 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 RBMS3Q6XE24 437 aaKnown RBP11.73□□□□□ -0.53
MKS1-203ENST00000393120 LHX4Q969G2 390 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 HIST1H2BAQ96A08 127 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 HEYLQ9NQ87 328 aaPredicted RBP11.73□□□□□ -0.53
MKS1-203ENST00000393120 KAAG1Q9UBP8 84 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 TCF19Q9Y242 345 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 MGAQ8IWI9 3026 aa11.73□□□□□ -0.53
MKS1-203ENST00000393120 ACACAQ13085 2346 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 PRSS46E5RG02 174 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 IFNA10P01566 189 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 CT45A6P0DMU7 189 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 CT45A5P0DMU8 189 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 CT45A7P0DMV0 189 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 APOBEC3AP31941 199 aaPredicted RBP11.72□□□□□ -0.53
MKS1-203ENST00000393120 CA7P43166 264 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 HSPE1P61604 102 aaKnown RBP11.72□□□□□ -0.53
MKS1-203ENST00000393120 TFF3Q07654 80 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 C8orf31Q8N9H6 132 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 OR10G9Q8NGN4 311 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 OR10G7Q8NGN6 311 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 CA5BP1Q8WTZ4 195 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 NIPSNAP3BQ9BS92 247 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ACTR3CQ9C0K3 210 aaPredicted RBP11.72□□□□□ -0.53
MKS1-203ENST00000393120 ANKRD11Q6UB99 2663 aaPredicted RBP11.72□□□□□ -0.53
MKS1-203ENST00000393120 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ZFP92A6NM28 416 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 B9A039 149 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
MKS1-203ENST00000393120 FBP1P09467 338 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 GNG10P50151 68 aa11.72□□□□□ -0.53
MKS1-203ENST00000393120 FGF8P55075 233 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms