RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 PIP4P1Q86T03 277 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 C11orf42Q8N5U0 333 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 GTF3C1Q12789 2109 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 FAM90A26D6RGX4 464 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 CHRNB4P30926 498 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 CDKN1AP38936 164 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 TFPI2P48307 235 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 GNG3P63215 75 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 CNEP1R1Q8N9A8 125 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 SGMS2Q8NHU3 365 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 NANOS1Q8WY41 292 aaKnown RBP12.59□□□□□ -0.39
SHTN1-204ENST00000392903 SLC35E1Q96K37 410 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 HSPB9Q9BQS6 159 aa12.59□□□□□ -0.39
SHTN1-204ENST00000392903 DOCK11Q5JSL3 2073 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 TRAV39A0A0B4J263 110 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 PDE6DO43924 150 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 COX5AP20674 150 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 IGHV1-2P23083 117 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 ALKBH6Q3KRA9 238 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 OR8G2PQ6IF36 304 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 FAM58AQ8N1B3 248 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 GMPPAQ96IJ6 420 aaPredicted RBP12.58□□□□□ -0.4
SHTN1-204ENST00000392903 ERRFI1Q9UJM3 462 aaPredicted RBP12.58□□□□□ -0.4
SHTN1-204ENST00000392903 MPC1Q9Y5U8 109 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 COMPP49747 757 aaPredicted RBP12.58□□□□□ -0.4
SHTN1-204ENST00000392903 ATP6V1FQ16864 119 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 TBC1D28Q2M2D7 210 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 TCF23Q7RTU1 214 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 OR5AU1Q8NGC0 362 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 VN1R17PQ8TDU5 208 aa12.58□□□□□ -0.4
SHTN1-204ENST00000392903 CEP250Q9BV73 2442 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 CACNA1DQ01668 2161 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 TRBV6-6A0A0A6YYG2 114 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 TRAV24A0A0B4J272 114 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 MSMO1Q15800 293 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 FFAR4Q5NUL3 377 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 SAPCD1Q5SSQ6 148 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 OR4B1Q8NGF8 309 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 SFRP2Q96HF1 295 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 TMEM147Q9BVK8 224 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 PATZ1Q9HBE1 687 aaKnown RBP12.57□□□□□ -0.4
SHTN1-204ENST00000392903 GP6Q9HCN6 339 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 WIPI2Q9Y4P8 454 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 AKAP13Q12802 2813 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 OR5B21A6NL26 309 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 SERF1AO75920 110 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 KRASP01116 189 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 GNB1P62873 340 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 RBX1P62877 108 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 IL1F10Q8WWZ1 152 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 CHODLQ9H9P2 273 aa12.57□□□□□ -0.4
SHTN1-204ENST00000392903 INTS1Q8N201 2190 aaKnown RBP12.57□□□□□ -0.4
SHTN1-204ENST00000392903 AGFG2O95081 481 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 CRISP2P16562 243 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 COTL1Q14019 142 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 ZNF585BQ52M93 769 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 WDR86Q86TI4 376 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 CIB3Q96Q77 187 aaPredicted RBP12.56□□□□□ -0.4
SHTN1-204ENST00000392903 GAL3ST2Q9H3Q3 398 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 DIDO1Q9BTC0 2240 aaKnown RBP12.56□□□□□ -0.4
SHTN1-204ENST00000392903 ZNF318Q5VUA4 2279 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 SPTBN2O15020 2390 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 SMPD2O60906 423 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 TGFBR3Q03167 851 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 UBALD1Q8TB05 177 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 LIN7CQ9NUP9 197 aaKnown RBP12.56□□□□□ -0.4
SHTN1-204ENST00000392903 DLL3Q9NYJ7 618 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 SLC45A2Q9UMX9 530 aa12.56□□□□□ -0.4
SHTN1-204ENST00000392903 HEATR1Q9H583 2144 aaKnown RBP12.55□□□□□ -0.4
SHTN1-204ENST00000392903 CACNA1GO43497 2377 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 TRAV9-1A0A075B6T8 112 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 C20orf202A1L168 122 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 NPIPB11E5RHQ5 1161 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 CDIPTO14735 213 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 DEGS1O15121 323 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 CLDN1O95832 211 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 FAM214BQ7L5A3 538 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 GVINP1Q7Z2Y8 2422 aa12.55□□□□□ -0.4
SHTN1-204ENST00000392903 SIRPB1O00241 398 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.4
SHTN1-204ENST00000392903 NDUFB4O95168 129 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 CTRLP40313 264 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 HOXA4Q00056 320 aaPredicted RBP12.54□□□□□ -0.4
SHTN1-204ENST00000392903 TMEM249Q2WGJ8 235 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 VWA1Q6PCB0 445 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 SLC25A40Q8TBP6 338 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 ORAOV1Q8WV07 137 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 NPCDR1Q9BY65 106 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 MDFIC2A0A1B0GVS7 189 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 F6UZH7 168 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.54□□□□□ -0.4
SHTN1-204ENST00000392903 ITGB1BP1O14713 200 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 MMP23AO75900 390 aa12.54□□□□□ -0.4
SHTN1-204ENST00000392903 NDUFB8O95169 186 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms