RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 HSD17B13Q7Z5P4 300 aaPredicted RBP17.51■□□□□ 0.39
GMDS-202ENST00000380815 ZNF429Q86V71 674 aa17.51■□□□□ 0.39
GMDS-202ENST00000380815 EIF4E3Q8N5X7 224 aaKnown RBP17.51■□□□□ 0.39
GMDS-202ENST00000380815 HSD17B11Q8NBQ5 300 aa17.51■□□□□ 0.39
GMDS-202ENST00000380815 OVOL3O00110 214 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 NDUFS7O75251 213 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 LIPFP07098 398 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 METTL15P1P0C7V9 234 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 OR2B8PP59922 312 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 SPCS3P61009 180 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 HBG1P69891 147 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 HBG2P69892 147 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 OR4A47Q6IF82 309 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 OR13D1Q8NGV5 346 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 AIFM2Q9BRQ8 373 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 PLA2G2EQ9NZK7 142 aa17.5■□□□□ 0.39
GMDS-202ENST00000380815 CEBPZOSA8MTT3 80 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 H0YJW9 148 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 APOA2P02652 100 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 IGKV1-16P04430 117 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 IL3RAP26951 378 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 ZDHHC16Q969W1 377 aa17.49■□□□□ 0.39
GMDS-202ENST00000380815 SSBP3Q9BWW4 388 aaPredicted RBP17.49■□□□□ 0.39
GMDS-202ENST00000380815 IGHV2-26A0A0B4J1V2 119 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 C22orf46C9J442 243 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 IFNA17P01571 189 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 FGF2P09038 288 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 RNF224P0DH78 156 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 TLE4Q04727 773 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 MARVELD3Q96A59 401 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 SPOCK3Q9BQ16 436 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 TRAV3A0A0B4J244 114 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 C15orf61A6NNL5 157 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 TEX46H3BTG2 121 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 IL6RP08887 468 aaPredicted RBP17.48■□□□□ 0.39
GMDS-202ENST00000380815 PRRX1P54821 245 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 ARL16Q0P5N6 197 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 HAPLN4Q86UW8 402 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 OSR1Q8TAX0 266 aaPredicted RBP17.48■□□□□ 0.39
GMDS-202ENST00000380815 TSNAXQ99598 290 aaKnown RBP17.48■□□□□ 0.39
GMDS-202ENST00000380815 NABP2Q9BQ15 211 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 PCGF1Q9BSM1 259 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 SH3BGRL3Q9H299 93 aa17.48■□□□□ 0.39
GMDS-202ENST00000380815 STRAPQ9Y3F4 350 aaKnown RBP17.48■□□□□ 0.39
GMDS-202ENST00000380815 FLNCQ14315 2725 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 I3L521 148 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 C1QL1O75973 258 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 IGLV1-47P01700 117 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 ATP6V0CP27449 155 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 REG1BP48304 166 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 RAB5CP51148 216 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 BLOC1S1P78537 153 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 BEND2Q8NDZ0 799 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 GNPNAT1Q96EK6 184 aaPredicted RBP17.47■□□□□ 0.39
GMDS-202ENST00000380815 OR4C12Q96R67 309 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 CLEC7AQ9BXN2 247 aa17.47■□□□□ 0.39
GMDS-202ENST00000380815 FOXA2Q9Y261 457 aaPredicted RBP17.47■□□□□ 0.39
GMDS-202ENST00000380815 USP9XQ93008 2570 aaPredicted RBP17.46■□□□□ 0.39
GMDS-202ENST00000380815 A8MXK9 166 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 DIAPH2-AS1Q14236 149 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 HLA-DRB5Q30154 266 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 TOR2AQ5JU69 321 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 TGIF2LXQ8IUE1 241 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 IGFBPL1Q8WX77 278 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 NARFLQ9H6Q4 476 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 TMEM14BQ9NUH8 114 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 NUP50Q9UKX7 468 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 EPG5Q9HCE0 2579 aa17.46■□□□□ 0.39
GMDS-202ENST00000380815 LOC105371242A0A075B767 164 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 SRRM4A7MD48 611 aaKnown RBP17.45■□□□□ 0.38
GMDS-202ENST00000380815 H7C2Y5 167 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 IFNA5P01569 189 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 TMEM177Q53S58 311 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 SPINK9Q5DT21 86 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 PXDC1Q5TGL8 231 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 PDPNQ86YL7 162 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 ZNF525Q8N782 197 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 MARC2Q969Z3 335 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 PARP11Q9NR21 331 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 ONECUT1Q9UBC0 465 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 SPTAN1Q13813 2472 aaKnown RBP17.45■□□□□ 0.38
GMDS-202ENST00000380815 NUDT19A8MXV4 375 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 SHOXO15266 292 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 LHX4Q969G2 390 aa17.45■□□□□ 0.38
GMDS-202ENST00000380815 FLYWCH2Q96CP2 140 aaKnown RBP17.45■□□□□ 0.38
GMDS-202ENST00000380815 ZNF462Q96JM2 2506 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 M0R1W7 72 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 MC5RP33032 325 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 LILRB2Q8N423 598 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 OR4C13Q8NGP0 309 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 CLCC1Q96S66 551 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 BET1LQ9NYM9 111 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 PRNDQ9UKY0 176 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 TCF19Q9Y242 345 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 MYO18BQ8IUG5 2567 aa17.44■□□□□ 0.38
GMDS-202ENST00000380815 RAB19A4D1S5 217 aa17.43■□□□□ 0.38
GMDS-202ENST00000380815 PMS2P5A8MQ11 134 aa17.43■□□□□ 0.38
GMDS-202ENST00000380815 UPK2O00526 184 aa17.43■□□□□ 0.38
GMDS-202ENST00000380815 SCAF4O95104 1147 aaKnown RBP17.43■□□□□ 0.38
GMDS-202ENST00000380815 ARG1P05089 322 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms