RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 SPATA25Q9BR10 227 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 C19orf73Q9NVV2 129 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 SIGLEC8Q9NYZ4 499 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 PRELID3BQ9Y3B1 194 aa13.15□□□□□ -0.3
HMGN1-204ENST00000380749 IGKV1D-8A0A087WSZ0 117 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 TUSC2O75896 110 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 SCGNO76038 276 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 SLC22A5O76082 557 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 CTXN2P0C2S0 81 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 SAA1P0DJI8 122 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-204ENST00000380749 RHOGP84095 191 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 IL34Q6ZMJ4 242 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 MMD2Q8IY49 270 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 DCUN1D5Q9BTE7 237 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 ZNF430Q9H8G1 570 aaPredicted RBP13.14□□□□□ -0.31
HMGN1-204ENST00000380749 OR2W1Q9Y3N9 320 aa13.14□□□□□ -0.31
HMGN1-204ENST00000380749 FCGR3BO75015 233 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 HACD4Q5VWC8 232 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 ST6GALNAC5Q9BVH7 336 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 DCSTAMPQ9H295 470 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 AKIP1Q9NQ31 210 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 ADAM30Q9UKF2 790 aa13.13□□□□□ -0.31
HMGN1-204ENST00000380749 ELF5Q9UKW6 265 aaPredicted RBP13.13□□□□□ -0.31
HMGN1-204ENST00000380749 ALMS1Q8TCU4 4167 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 SMIM30A4D0T7 59 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 NOTOA8MTQ0 251 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 J3QRK9 145 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 AIREO43918 545 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 MRPS14O60783 128 aaKnown RBP13.12□□□□□ -0.31
HMGN1-204ENST00000380749 ATP5G2Q06055 141 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 FAM209BQ5JX69 171 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 SLC25A42Q86VD7 318 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 NR2C2APQ86WQ0 139 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 OR2K2Q8NGT1 345 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 TUBA4BQ9H853 241 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 RAB26Q9ULW5 256 aa13.12□□□□□ -0.31
HMGN1-204ENST00000380749 RBMX2Q9Y388 322 aaKnown RBP13.12□□□□□ -0.31
HMGN1-204ENST00000380749 PLECQ15149 4684 aaKnown RBP13.12□□□□□ -0.31
HMGN1-204ENST00000380749 RBMXL2O75526 392 aaKnown RBP13.11□□□□□ -0.31
HMGN1-204ENST00000380749 CSN3P07498 182 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 NFYAP23511 347 aaPredicted RBP13.11□□□□□ -0.31
HMGN1-204ENST00000380749 PSMB9P28065 219 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 GNG2P59768 71 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 OR2B11Q5JQS5 317 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 NECAP1Q8NC96 275 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 OR4S2Q8NH73 311 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 VSTM2AQ8TAG5 236 aa13.11□□□□□ -0.31
HMGN1-204ENST00000380749 HSD17B10Q99714 261 aaKnown RBP13.11□□□□□ -0.31
HMGN1-204ENST00000380749 TRBV9A0A0B4J1U6 114 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 TMEM235A6NFC5 223 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 BMPR1BO00238 502 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 HLA-DQB1P01920 261 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 PRH1P02810 166 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 FGF9P31371 208 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-204ENST00000380749 C10orf55Q5SWW7 151 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 UBE2UQ5VVX9 321 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 CNIH2Q6PI25 160 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 TTC9CQ8N5M4 171 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 FCGR1BQ92637 280 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 THAP7Q9BT49 309 aaPredicted RBP13.1□□□□□ -0.31
HMGN1-204ENST00000380749 TXNL4BQ9NX01 149 aaKnown RBP13.1□□□□□ -0.31
HMGN1-204ENST00000380749 ZNF257Q9Y2Q1 563 aa13.1□□□□□ -0.31
HMGN1-204ENST00000380749 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.09□□□□□ -0.31
HMGN1-204ENST00000380749 DPPA5A6NC42 116 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 KBTBD11O94819 623 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 IFNA6P05013 189 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 ZNF45Q02386 682 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 HAGHQ16775 308 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 TPRA1Q86W33 373 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 LAX1Q8IWV1 398 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 DYNLRB2Q8TF09 96 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 TCTEX1D2Q8WW35 142 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 OR51E2Q9H255 320 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 EDA2RQ9HAV5 297 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 DAPK2Q9UIK4 370 aa13.09□□□□□ -0.31
HMGN1-204ENST00000380749 IGKV1D-13A0A0B4J2D9 117 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 OR2J3O76001 311 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 IGKV1-13P0DP09 117 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 RPL30P62888 115 aaKnown RBP13.08□□□□□ -0.31
HMGN1-204ENST00000380749 C15orf32Q32M92 178 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 ZFAND6Q6FIF0 208 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 OR2A7Q96R45 310 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 ANXA10Q9UJ72 324 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 SSR3Q9UNL2 185 aa13.08□□□□□ -0.31
HMGN1-204ENST00000380749 RRP15Q9Y3B9 282 aaKnown RBP13.08□□□□□ -0.31
HMGN1-204ENST00000380749 IZUMO1RA6ND01 250 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 TPPPO94811 219 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 MAS1LP35410 378 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
HMGN1-204ENST00000380749 ARPC4P59998 168 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 CD81P60033 236 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 SFXN4Q6P4A7 337 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 VKORC1L1Q8N0U8 176 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 KCTD12Q96CX2 325 aaKnown RBP13.07□□□□□ -0.32
HMGN1-204ENST00000380749 RHBDL2Q9NX52 303 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 SLC2A8Q9NY64 477 aa13.07□□□□□ -0.32
HMGN1-204ENST00000380749 SPATA2Q9UM82 520 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms