RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 OR9G9P0C7N8 305 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 NDUFB7P17568 137 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 TMEM41BQ5BJD5 291 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 OR8G2PQ6IF36 304 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 DMRTC2Q8IXT2 367 aaPredicted RBP19.03■□□□□ 0.64
VPS16-201ENST00000380443 ZNF251Q9BRH9 671 aa19.03■□□□□ 0.64
VPS16-201ENST00000380443 SAA2-SAA4A0A096LPE2 208 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 GPR37O15354 613 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 SAA2P0DJI9 122 aaPredicted RBP19.02■□□□□ 0.64
VPS16-201ENST00000380443 ATF4P18848 351 aaPredicted RBP19.02■□□□□ 0.64
VPS16-201ENST00000380443 LINC00205P59089 165 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 POU2AF1Q16633 256 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 ZNF506Q5JVG8 444 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 AIFM2Q9BRQ8 373 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 RSG1Q9BU20 258 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 QTRT1Q9BXR0 403 aaKnown RBP19.02■□□□□ 0.64
VPS16-201ENST00000380443 KAAG1Q9UBP8 84 aa19.02■□□□□ 0.64
VPS16-201ENST00000380443 RP1L1Q8IWN7 2480 aaPredicted RBP19.02■□□□□ 0.64
VPS16-201ENST00000380443 IFNA17P01571 189 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 HSPB1P04792 205 aaKnown RBP19.02■□□□□ 0.63
VPS16-201ENST00000380443 NFYBP25208 207 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 KHDC3LQ587J8 217 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 GGACTQ9BVM4 153 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 RPRMQ9NS64 109 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 DCAF16Q9NXF7 216 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 SPTA1P02549 2419 aa19.02■□□□□ 0.63
VPS16-201ENST00000380443 HRASP01112 189 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 CCL20P78556 96 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 RELBQ01201 579 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 PMS2P11Q13670 270 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 LRRC10Q5BKY1 277 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 LYG1Q8N1E2 194 aa19.01■□□□□ 0.63
VPS16-201ENST00000380443 RAI1Q7Z5J4 1906 aaPredicted RBP19.01■□□□□ 0.63
VPS16-201ENST00000380443 UBE2L5PA0A1B0GUS4 154 aa19■□□□□ 0.63
VPS16-201ENST00000380443 NDUFB3O43676 98 aa19■□□□□ 0.63
VPS16-201ENST00000380443 F12P00748 615 aaPredicted RBP19■□□□□ 0.63
VPS16-201ENST00000380443 RPL31P62899 125 aaKnown RBP19■□□□□ 0.63
VPS16-201ENST00000380443 HEPN1Q6WQI6 88 aa19■□□□□ 0.63
VPS16-201ENST00000380443 TGIF2LYQ8IUE0 185 aa19■□□□□ 0.63
VPS16-201ENST00000380443 C8orf31Q8N9H6 132 aa19■□□□□ 0.63
VPS16-201ENST00000380443 ZDHHC16Q969W1 377 aa19■□□□□ 0.63
VPS16-201ENST00000380443 SMCO4Q9NRQ5 59 aa19■□□□□ 0.63
VPS16-201ENST00000380443 TMEM140Q9NV12 185 aa19■□□□□ 0.63
VPS16-201ENST00000380443 ARG1P05089 322 aa19■□□□□ 0.63
VPS16-201ENST00000380443 OR10G4Q8NGN3 311 aa19■□□□□ 0.63
VPS16-201ENST00000380443 ZNF714Q96N38 554 aa19■□□□□ 0.63
VPS16-201ENST00000380443 FSTL3O95633 263 aa18.99■□□□□ 0.63
VPS16-201ENST00000380443 PAX6P26367 422 aa18.99■□□□□ 0.63
VPS16-201ENST00000380443 SOHLH1Q5JUK2 328 aa18.99■□□□□ 0.63
VPS16-201ENST00000380443 CLDND2Q8NHS1 167 aa18.99■□□□□ 0.63
VPS16-201ENST00000380443 CCL17Q92583 94 aa18.99■□□□□ 0.63
VPS16-201ENST00000380443 SPENQ96T58 3664 aaKnown RBP18.98■□□□□ 0.63
VPS16-201ENST00000380443 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.98■□□□□ 0.63
VPS16-201ENST00000380443 C17orf112F2Z3M2 114 aa18.98■□□□□ 0.63
VPS16-201ENST00000380443 CCL21O00585 134 aa18.98■□□□□ 0.63
VPS16-201ENST00000380443 RTL8BQ17RB0 113 aa18.98■□□□□ 0.63
VPS16-201ENST00000380443 LEAP2Q969E1 77 aa18.98■□□□□ 0.63
VPS16-201ENST00000380443 FOXA2Q9Y261 457 aaPredicted RBP18.98■□□□□ 0.63
VPS16-201ENST00000380443 C15orf61A6NNL5 157 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 C15orf62A8K5M9 175 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 IGHV3-7P01780 117 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 VDAC2P45880 294 aaPredicted RBP18.97■□□□□ 0.63
VPS16-201ENST00000380443 RHEBQ15382 184 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 FAM71F2Q6NXP2 309 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 ZCCHC24Q8N2G6 241 aaKnown RBP18.97■□□□□ 0.63
VPS16-201ENST00000380443 ZNF709Q8N972 641 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 ZNF383Q8NA42 475 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 A0A1B0GV50 99 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 MDKP21741 143 aaPredicted RBP18.97■□□□□ 0.63
VPS16-201ENST00000380443 TMEM88Q6PEY1 159 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 C1orf229Q6ZS94 237 aaPredicted RBP18.97■□□□□ 0.63
VPS16-201ENST00000380443 SSX9Q7RTT3 188 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 RHOVQ96L33 236 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 RARRES2Q99969 163 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 TUBA4BQ9H853 241 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 CFAP46Q8IYW2 2715 aa18.97■□□□□ 0.63
VPS16-201ENST00000380443 IFNA1P01562 189 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 SRP19P09132 144 aaKnown RBP18.96■□□□□ 0.63
VPS16-201ENST00000380443 FGF7P21781 194 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 OR2B8PP59922 312 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 RAB11AP62491 216 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 ICAM4Q14773 271 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 ZNF787Q6DD87 383 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 ZNF833PQ6ZTB9 187 aa18.96■□□□□ 0.63
VPS16-201ENST00000380443 RCC1LQ96I51 464 aaKnown RBP18.96■□□□□ 0.63
VPS16-201ENST00000380443 HEYLQ9NQ87 328 aaPredicted RBP18.96■□□□□ 0.63
VPS16-201ENST00000380443 A0A1W2PPE3 182 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 H7C2Y5 167 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 MPDU1O75352 247 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 HSPE1P61604 102 aaKnown RBP18.95■□□□□ 0.62
VPS16-201ENST00000380443 TMEM200BQ69YZ2 307 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 CBLN2Q8IUK8 224 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 LINC00311Q8N616 119 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 ZNF596Q8TC21 504 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 CISD1Q9NZ45 108 aaKnown RBP18.95■□□□□ 0.62
VPS16-201ENST00000380443 PRNDQ9UKY0 176 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 IGHV1-69-2A0A0G2JMI3 117 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 LOC102723971A0A1B0GUV8 181 aa18.95■□□□□ 0.62
VPS16-201ENST00000380443 NDUFS6O75380 124 aaKnown RBP18.95■□□□□ 0.62
VPS16-201ENST00000380443 MMP23AO75900 390 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms