RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 SLC35D1Q9NTN3 355 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 YLPM1P49750 1951 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 SFTA3P0C7M3 94 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 CT45A6P0DMU7 189 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 CT45A5P0DMU8 189 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 CT45A7P0DMV0 189 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 REG1BP48304 166 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 SPCS3P61009 180 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 RELBQ01201 579 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 OR4A47Q6IF82 309 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 RAB1BQ9H0U4 201 aa12.1□□□□□ -0.47
RAB3IP-203ENST00000378809 ARFGEF3Q5TH69 2177 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 LY6HO94772 140 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 H2AFB1P0C5Y9 115 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 GNLYP22749 145 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 HOXA1P49639 335 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 LRRC75BQ2VPJ9 315 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 SVBPQ8N300 66 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 COMMD1Q8N668 190 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 PINX1Q96BK5 328 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 WDR61Q9GZS3 305 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 HIPK2Q9H2X6 1198 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 HEYLQ9NQ87 328 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
RAB3IP-203ENST00000378809 H7C2Y5 167 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 F12P00748 615 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 HRASP01112 189 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 IFNA10P01566 189 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 IGKV1-16P04430 117 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 CD5P06127 495 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 PPT1P50897 306 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 GUK1Q16774 197 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 SFT2D1Q8WV19 159 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 MRPL20Q9BYC9 149 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 TLE4Q04727 773 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 TMEM155Q4W5P6 130 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 ZNF833PQ6ZTB9 187 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 LFNGQ8NES3 379 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 TAF15Q92804 592 aaKnown RBP eCLIP12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 PBDC1Q9BVG4 233 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 TMEM147Q9BVK8 224 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 SEC11CQ9BY50 192 aa12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 NKX6-2Q9C056 277 aaPredicted RBP12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 RALYQ9UKM9 306 aaKnown RBP12.08□□□□□ -0.48
RAB3IP-203ENST00000378809 C15orf61A6NNL5 157 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 C9JQL5 133 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 NUPL2O15504 423 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 PPIHO43447 177 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 APOA2P02652 100 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 SOD3P08294 240 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 OR8U8P0C7N1 319 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 ELLP55199 621 aaPredicted RBP12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 RPP30P78346 268 aaKnown RBP12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 PEA15Q15121 130 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 OR52E5Q8NH55 327 aa12.07□□□□□ -0.48
RAB3IP-203ENST00000378809 TRBV23-1A0A0A0MS06 115 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 J3QR06 171 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 IGHV1-8P0DP01 117 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 M6PRP20645 277 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 AARDQ4LEZ3 155 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 C4orf17Q53FE4 359 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 HINT2Q9BX68 163 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 TCF19Q9Y242 345 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 LRBAP50851 2863 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 TMEM8BA6NDV4 472 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 C15orf62A8K5M9 175 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 PMS2P5A8MQ11 134 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 FGF7P21781 194 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 DLX6P56179 175 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 RAB2AP61019 212 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 CCL20P78556 96 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 DHRS7BQ6IAN0 325 aaPredicted RBP12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 DPPA3Q6W0C5 159 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 ZNF429Q86V71 674 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 PUSL1Q8N0Z8 303 aaKnown RBP12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 ABHD12Q8N2K0 398 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 PSMG3Q9BT73 122 aaPredicted RBP12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 VSIRQ9H7M9 311 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 ENY2Q9NPA8 101 aa12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 CARHSP1Q9Y2V2 147 aaKnown RBP12.06□□□□□ -0.48
RAB3IP-203ENST00000378809 LY86O95711 162 aa12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 OR9G1Q8NH87 305 aa12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 PARD6GQ9BYG4 376 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 RPRMQ9NS64 109 aa12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 FOXA2Q9Y261 457 aaPredicted RBP12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 TPRP12270 2363 aaKnown RBP12.05□□□□□ -0.48
RAB3IP-203ENST00000378809 SMCO3A2RU48 225 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 TSPAN4O14817 238 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 OPN1MWP04001 364 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 OPN1MW2P0DN77 364 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 OPN1MW3P0DN78 364 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 GNB2P62879 340 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 SERF2P84101 59 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 PRB3Q04118 309 aaPredicted RBP12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 DIAPH2-AS1Q14236 149 aa12.04□□□□□ -0.48
RAB3IP-203ENST00000378809 C10orf91Q5T1B1 145 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms