RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 CLDND2Q8NHS1 167 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 GNPNAT1Q96EK6 184 aaPredicted RBP16.05■□□□□ 0.16
SSU72-204ENST00000378726 C5orf30Q96GV9 206 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 AGMATQ9BSE5 352 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 TMEM204Q9BSN7 226 aa16.05■□□□□ 0.16
SSU72-204ENST00000378726 NKX6-3A6NJ46 265 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 YPEL1O60688 119 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 LOXL3P58215 753 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 BAXQ07812 192 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 FGFRL1Q8N441 504 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 YPEL2Q96QA6 119 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 WSB1Q9Y6I7 421 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 URGCP-MRPS24S4R325 110 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 ACACBO00763 2458 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 A0A0G2JRQ6 117 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 KBTBD11-OT1A0A1B0GTJ5 212 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 IGKV1-39P01597 117 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 IGKV1D-39P04432 117 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 HSPB1P04792 205 aaKnown RBP16.04■□□□□ 0.16
SSU72-204ENST00000378726 NDUFB7P17568 137 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 NDUFA6P56556 154 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 C4orf17Q53FE4 359 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 PFDN5Q99471 154 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 CLN8Q9UBY8 286 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 ARFGEF3Q5TH69 2177 aa16.04■□□□□ 0.16
SSU72-204ENST00000378726 IGHV1-69-2A0A0G2JMI3 117 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 ZG16O60844 167 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 MMP9P14780 707 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 ERVFRD-1P60508 538 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 RPL30P62888 115 aaKnown RBP16.03■□□□□ 0.16
SSU72-204ENST00000378726 EIF4EBP1Q13541 118 aaPredicted RBP16.03■□□□□ 0.16
SSU72-204ENST00000378726 MSMO1Q15800 293 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 ZNF674Q2M3X9 581 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 BTNL3Q6UXE8 466 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 GPR146Q96CH1 333 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 ATP5SQ99766 215 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 ABCA4P78363 2273 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 HIVEP3Q5T1R4 2406 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 A0A087WWC5 75 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 TGIF2-C20orf24A0A0A6YYL0 155 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 CLDN14O95500 239 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 IGHV3-7P01780 117 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 SSTP61278 116 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 TVP23CQ96ET8 276 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 RAB9BQ9NP90 201 aa16.03■□□□□ 0.16
SSU72-204ENST00000378726 SLC25A10Q9UBX3 287 aaPredicted RBP16.03■□□□□ 0.16
SSU72-204ENST00000378726 H3BP45 60 aa16.02■□□□□ 0.16
SSU72-204ENST00000378726 TAS2R30P59541 319 aa16.02■□□□□ 0.16
SSU72-204ENST00000378726 RPL23AP62750 156 aaKnown RBP16.02■□□□□ 0.16
SSU72-204ENST00000378726 ZNF295-AS1Q8N0V1 137 aa16.02■□□□□ 0.16
SSU72-204ENST00000378726 RNASE11Q8TAA1 199 aaKnown RBP16.02■□□□□ 0.16
SSU72-204ENST00000378726 RAI1Q7Z5J4 1906 aaPredicted RBP16.02■□□□□ 0.16
SSU72-204ENST00000378726 TNFRSF13BO14836 293 aaPredicted RBP16.02■□□□□ 0.15
SSU72-204ENST00000378726 CLDN1O95832 211 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 ZNF134P52741 427 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 TLE4Q04727 773 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 TCF23Q7RTU1 214 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 THNSL2Q86YJ6 484 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 CORO2AQ92828 525 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 DOK5Q9P104 306 aa16.02■□□□□ 0.15
SSU72-204ENST00000378726 CDX1P47902 265 aaPredicted RBP16.01■□□□□ 0.15
SSU72-204ENST00000378726 DEFA6Q01524 100 aa16.01■□□□□ 0.15
SSU72-204ENST00000378726 TMEM267Q0VDI3 215 aaPredicted RBP16.01■□□□□ 0.15
SSU72-204ENST00000378726 CATR1Q13166 79 aa16.01■□□□□ 0.15
SSU72-204ENST00000378726 IZUMO4Q1ZYL8 232 aa16.01■□□□□ 0.15
SSU72-204ENST00000378726 LYPD2Q6UXB3 125 aa16.01■□□□□ 0.15
SSU72-204ENST00000378726 LSM10Q969L4 123 aaKnown RBP16.01■□□□□ 0.15
SSU72-204ENST00000378726 RBMXL1Q96E39 390 aaKnown RBP16.01■□□□□ 0.15
SSU72-204ENST00000378726 NIPSNAP3BQ9BS92 247 aa16.01■□□□□ 0.15
SSU72-204ENST00000378726 A0A1B0GU03 582 aa16■□□□□ 0.15
SSU72-204ENST00000378726 RAMP3O60896 148 aa16■□□□□ 0.15
SSU72-204ENST00000378726 IGKV1-5P01602 117 aa16■□□□□ 0.15
SSU72-204ENST00000378726 GPR12P47775 334 aa16■□□□□ 0.15
SSU72-204ENST00000378726 Q3ZCU0 254 aa16■□□□□ 0.15
SSU72-204ENST00000378726 Q6ZRM9 215 aa16■□□□□ 0.15
SSU72-204ENST00000378726 ITLN2Q8WWU7 325 aaPredicted RBP16■□□□□ 0.15
SSU72-204ENST00000378726 GFOD1Q9NXC2 390 aa16■□□□□ 0.15
SSU72-204ENST00000378726 SPTBN1Q01082 2364 aaKnown RBP16■□□□□ 0.15
SSU72-204ENST00000378726 hADV38S2A0JD32 116 aa16■□□□□ 0.15
SSU72-204ENST00000378726 RD3LP0DJH9 198 aa16■□□□□ 0.15
SSU72-204ENST00000378726 SLC25A6P12236 298 aa16■□□□□ 0.15
SSU72-204ENST00000378726 LINC00205P59089 165 aa16■□□□□ 0.15
SSU72-204ENST00000378726 C9orf152Q5JTZ5 239 aa16■□□□□ 0.15
SSU72-204ENST00000378726 UTF1Q5T230 341 aa16■□□□□ 0.15
SSU72-204ENST00000378726 SPNS3Q6ZMD2 512 aa16■□□□□ 0.15
SSU72-204ENST00000378726 ZNF66Q6ZN08 573 aa16■□□□□ 0.15
SSU72-204ENST00000378726 LEAP2Q969E1 77 aa16■□□□□ 0.15
SSU72-204ENST00000378726 HSD17B10Q99714 261 aaKnown RBP16■□□□□ 0.15
SSU72-204ENST00000378726 LOC102723971A0A1B0GUV8 181 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 KIAA1324LA8MWY0 1029 aaPredicted RBP15.99■□□□□ 0.15
SSU72-204ENST00000378726 PROP1O75360 226 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 HBE1P02100 147 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 COL8A2P25067 703 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 S100A2P29034 98 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 GPX4P36969 197 aaPredicted RBP15.99■□□□□ 0.15
SSU72-204ENST00000378726 KHDC3LQ587J8 217 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 PYY3Q5JQD4 70 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 LINC00473A8K010 186 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 C17orf98A8MV24 154 aa15.99■□□□□ 0.15
SSU72-204ENST00000378726 LYNX1G3V0Z9 82 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms