RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 LY6LH3BQJ8 138 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 AVPP01185 164 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 CATR1Q13166 79 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 LHFPL4Q7Z7J7 247 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 DDB2Q92466 427 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 MRPL20Q9BYC9 149 aaKnown RBP10.54□□□□□ -0.72
KRT40-201ENST00000377755 PLEKHA2Q9HB19 425 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 LIN7CQ9NUP9 197 aaKnown RBP10.54□□□□□ -0.72
KRT40-201ENST00000377755 TMED3Q9Y3Q3 217 aa10.54□□□□□ -0.72
KRT40-201ENST00000377755 CENPVL3A0A0U1RRI6 287 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 SMAD7O15105 426 aaKnown RBP10.53□□□□□ -0.72
KRT40-201ENST00000377755 CDS2O95674 445 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 IGKV1-39P01597 117 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 IGKV1D-39P04432 117 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 FGF2P09038 288 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 M6PRP20645 277 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 IL3RAP26951 378 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 HTR1DP28221 377 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 UBE2E1P51965 193 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 SPAG16Q8N0X2 631 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 RNF141Q8WVD5 230 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 TMEM56Q96MV1 263 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 OR5AC2Q9NZP5 309 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 TMEM56-RWDD3S4R434 201 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.53□□□□□ -0.72
KRT40-201ENST00000377755 ZANQ9Y493 2812 aa10.53□□□□□ -0.72
KRT40-201ENST00000377755 CELSR1Q9NYQ6 3014 aa10.52□□□□□ -0.72
KRT40-201ENST00000377755 ITPR3Q14573 2671 aa10.52□□□□□ -0.72
KRT40-201ENST00000377755 E5RGE8 158 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 K7EPK0 472 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 FCGR3BO75015 233 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 DEDDO75618 318 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 GATA3P23771 443 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 PAX6P26367 422 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 ZNF816Q0VGE8 651 aaPredicted RBP10.52□□□□□ -0.73
KRT40-201ENST00000377755 TMEM268Q5VZI3 342 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 LYZL2Q7Z4W2 148 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 TGIF2LXQ8IUE1 241 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 SELENOHQ8IZQ5 122 aaKnown RBP10.52□□□□□ -0.73
KRT40-201ENST00000377755 FAM71E2Q8N5Q1 922 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 C17orf50Q8WW18 174 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 C18orf12Q96KH6 178 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 KRTAP3-3Q9BYR6 98 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 KRTAP3-2Q9BYR7 98 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 NSG2Q9Y328 171 aa10.52□□□□□ -0.73
KRT40-201ENST00000377755 AMMECR1Q9Y4X0 333 aaPredicted RBP10.52□□□□□ -0.73
KRT40-201ENST00000377755 IGHV3OR16-10A0A075B7F0 116 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 NUDT19A8MXV4 375 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 SERPINE2P07093 398 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 LPAR6P43657 344 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 THBS3P49746 956 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 ZNF695Q8IW36 515 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 SLC35G3Q8N808 338 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 RRNAD1Q96FB5 475 aaKnown RBP10.51□□□□□ -0.73
KRT40-201ENST00000377755 SPIN2AQ99865 258 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 SPIN2BQ9BPZ2 258 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 NABP2Q9BQ15 211 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 HILPDAQ9Y5L2 63 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 TRAV40A0A0B4J280 105 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 JTBO76095 146 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 RPL12P30050 165 aaKnown RBP10.51□□□□□ -0.73
KRT40-201ENST00000377755 TPTE2P1Q5T6R2 138 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 CYB5R2Q6BCY4 276 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 UQCC3Q6UW78 93 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 SUN5Q8TC36 379 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 RPEQ96AT9 228 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 ADTRPQ96IZ2 230 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 PRELID3BQ9Y3B1 194 aa10.51□□□□□ -0.73
KRT40-201ENST00000377755 NOTCH2Q04721 2471 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 H0YJW9 148 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 TEX46H3BTG2 121 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 S1PR2O95136 353 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 SCGB1D2O95969 90 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 GAPDHP04406 335 aaKnown RBP10.5□□□□□ -0.73
KRT40-201ENST00000377755 IGHV4-38-2P0DP08 117 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 LGALS4P56470 323 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 FAM74A1Q5RGS3 127 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 RUSC1-AS1Q66K80 236 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 FOXRED2Q8IWF2 684 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 DYNAPQ8N1N2 210 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 TCTEX1D1Q8N7M0 179 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 OR5AN1Q8NGI8 311 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 AJUBAQ96IF1 538 aa10.5□□□□□ -0.73
KRT40-201ENST00000377755 LSM5Q9Y4Y9 91 aaKnown RBP10.5□□□□□ -0.73
KRT40-201ENST00000377755 IGHV3-72A0A0B4J1Y9 119 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 IGHV1-69DA0A0B4J2H0 117 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 IGHV1-3A0A0C4DH29 117 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 RAB19A4D1S5 217 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 NPFFO15130 113 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 FGF16O43320 207 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 IGHV1-69P01742 117 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 IGKV1-16P04430 117 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 HKR1P10072 659 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 SAA4P35542 130 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 SSX2Q16385 188 aa10.49□□□□□ -0.73
KRT40-201ENST00000377755 KLF17Q5JT82 389 aaPredicted RBP10.49□□□□□ -0.73
KRT40-201ENST00000377755 MINOS1Q5TGZ0 78 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms