RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 CCL17Q92583 94 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 LEAP2Q969E1 77 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 DYNLRB1Q9NP97 96 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM140Q9NV12 185 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 BET1LQ9NYM9 111 aa10.25□□□□□ -0.77
PRPF4-202ENST00000374199 PTPRZ1P23471 2315 aaPredicted RBP10.24□□□□□ -0.77
PRPF4-202ENST00000374199 FNDC10F2Z333 226 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 NXPH3O95157 252 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 GOSR1O95249 250 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 COL8A2P25067 703 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 FHITP49789 147 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 PVRIGQ6DKI7 326 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 RFNGQ9Y644 331 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 H0YJW9 148 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 IGLV1-47P01700 117 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 IAPPP10997 89 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 MRGPRG-AS1Q2M3A8 158 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 OR2B11Q5JQS5 317 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 HSD17B11Q8NBQ5 300 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 SPTBN4Q9H254 2564 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 A0A1W2PPR1 153 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 RNASEK-C17orf49H0YIS7 233 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 J3QR06 171 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 H2AFB1P0C5Y9 115 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 IGHV1-8P0DP01 117 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 HFEQ30201 348 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 ZDHHC16Q969W1 377 aa10.24□□□□□ -0.77
PRPF4-202ENST00000374199 METTL15P1P0C7V9 234 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 CCL3L1P16619 93 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM249Q2WGJ8 235 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 OR4A5Q8NH83 315 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 OSR1Q8TAX0 266 aaPredicted RBP10.23□□□□□ -0.77
PRPF4-202ENST00000374199 NEU4Q8WWR8 484 aaPredicted RBP10.23□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM186Q96B77 213 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 HRH4Q9H3N8 390 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 MEX3AA1L020 520 aaKnown RBP10.23□□□□□ -0.77
PRPF4-202ENST00000374199 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 IGLV2-23P01705 113 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 SLC38A11Q08AI6 406 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 ZNF726P1Q15940 193 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 LTC4SQ16873 150 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 ATRAIDQ6UW56 229 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 OR10G4Q8NGN3 311 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 RNASE11Q8TAA1 199 aaKnown RBP10.23□□□□□ -0.77
PRPF4-202ENST00000374199 TAF15Q92804 592 aaKnown RBP eCLIP10.23□□□□□ -0.77
PRPF4-202ENST00000374199 C1orf159Q96HA4 380 aa10.23□□□□□ -0.77
PRPF4-202ENST00000374199 TRAV3A0A0B4J244 114 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 A6NNC1 897 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 C1QL1O75973 258 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 ATP5IP56385 69 aaPredicted RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM182Q6ZP80 229 aaPredicted RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM217Q8N7C4 229 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 BEND2Q8NDZ0 799 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 PINX1Q96BK5 328 aaKnown RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM147Q9BVK8 224 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 SRRM4A7MD48 611 aaKnown RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 H3BP45 60 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 DNASE2O00115 360 aaPredicted RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 SOX15O60248 233 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 TSPAN9O75954 239 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 NDUFB7P17568 137 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 RUNX1Q01196 453 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 KIAA1456Q9P272 454 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 RALYQ9UKM9 306 aaKnown RBP10.22□□□□□ -0.77
PRPF4-202ENST00000374199 UPK2O00526 184 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 PDPNQ86YL7 162 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 LYG1Q8N1E2 194 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 RAB39BQ96DA2 213 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 NABP2Q9BQ15 211 aa10.22□□□□□ -0.77
PRPF4-202ENST00000374199 MED19A0JLT2 244 aaPredicted RBP10.21□□□□□ -0.77
PRPF4-202ENST00000374199 IGKV1-16P04430 117 aa10.21□□□□□ -0.77
PRPF4-202ENST00000374199 SOD3P08294 240 aa10.21□□□□□ -0.77
PRPF4-202ENST00000374199 AIFM2Q9BRQ8 373 aa10.21□□□□□ -0.77
PRPF4-202ENST00000374199 TMEM133Q9H2Q1 129 aa10.21□□□□□ -0.77
PRPF4-202ENST00000374199 LSM4Q9Y4Z0 139 aaKnown RBP10.21□□□□□ -0.77
PRPF4-202ENST00000374199 HRASP01112 189 aa10.21□□□□□ -0.78
PRPF4-202ENST00000374199 CRYGBP07316 175 aa10.21□□□□□ -0.78
PRPF4-202ENST00000374199 OR9G1Q8NH87 305 aa10.21□□□□□ -0.78
PRPF4-202ENST00000374199 WDR83OSQ9Y284 106 aa10.21□□□□□ -0.78
PRPF4-202ENST00000374199 A0A1W2PPE3 182 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 PAX6P26367 422 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 CAMLGP49069 296 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 ERVFRD-1P60508 538 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 PRCDQ00LT1 54 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 SPANXN5Q5MJ07 72 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 RHOVQ96L33 236 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 MS4A7Q9GZW8 240 aaPredicted RBP10.2□□□□□ -0.78
PRPF4-202ENST00000374199 ZNRD1Q9P1U0 126 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 TCF19Q9Y242 345 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 IFNA5P01569 189 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 ERVK-16P61578 105 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 HSPE1P61604 102 aaKnown RBP10.2□□□□□ -0.78
PRPF4-202ENST00000374199 DLK1P80370 383 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 BTN1A1Q13410 526 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 HABP2Q14520 560 aaPredicted RBP10.2□□□□□ -0.78
PRPF4-202ENST00000374199 TMEM41BQ5BJD5 291 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 ZNF506Q5JVG8 444 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 SVBPQ8N300 66 aa10.2□□□□□ -0.78
PRPF4-202ENST00000374199 MRPL20Q9BYC9 149 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms