RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 S1PR3Q99500 378 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 CCL13Q99616 98 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 TMPRSS5Q9H3S3 457 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 DCAF16Q9NXF7 216 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 VAX2Q9UIW0 290 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 URGCP-MRPS24S4R325 110 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 SMG1Q96Q15 3661 aaKnown RBP13.09□□□□□ -0.31
PHTF1-201ENST00000357783 A0A0G2JNJ9 132 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 GYPAP02724 150 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 CGB3P0DN86 165 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 CGB7P0DN87 165 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 STUMQ69YW2 141 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 OR10G9Q8NGN4 311 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 OR10G7Q8NGN6 311 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 FAM222BQ8WU58 562 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 Q9UFV3 132 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 IL19Q9UHD0 177 aa13.09□□□□□ -0.31
PHTF1-201ENST00000357783 TRAV3A0A0B4J244 114 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 IFNA1P01562 189 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 NBL1P41271 181 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 CT45A1Q5HYN5 189 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 DOLPP1Q86YN1 238 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 WFDC8Q8IUA0 241 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 CISD2Q8N5K1 135 aaKnown RBP13.08□□□□□ -0.32
PHTF1-201ENST00000357783 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 ZNF709Q8N972 641 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 CT45A3Q8NHU0 189 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 GFOD1Q9NXC2 390 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 TP53TG5Q9Y2B4 290 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 A0A087WWC5 75 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 TRGV10A0A0A0MS01 117 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 DEFA4P12838 97 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 TNFSF4P23510 183 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 HEPN1Q6WQI6 88 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 SDSLQ96GA7 329 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 GAFA1Q96PS6 74 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 NIT2Q9NQR4 276 aa13.08□□□□□ -0.32
PHTF1-201ENST00000357783 DCHS1Q96JQ0 3298 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 PRRG2O14669 202 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 GNB2P62879 340 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 TMEM140Q9NV12 185 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 SAA2-SAA4A0A096LPE2 208 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 CTXND1A0A1B0GTU2 59 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 RBFOX2O43251 390 aaKnown RBP eCLIP13.07□□□□□ -0.32
PHTF1-201ENST00000357783 IFNA10P01566 189 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 SAA2P0DJI9 122 aaPredicted RBP13.07□□□□□ -0.32
PHTF1-201ENST00000357783 NQO2P16083 231 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 RAB7AP51149 207 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 SPCS3P61009 180 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 ZNF600Q6ZNG1 722 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 TCF23Q7RTU1 214 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 Q8WTZ3 238 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 FAM216AQ8WUB2 273 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 MALSU1Q96EH3 234 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 OR51M1Q9H341 326 aa13.07□□□□□ -0.32
PHTF1-201ENST00000357783 MBP02144 154 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 MAS1LP35410 378 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 RPS10P46783 165 aaKnown RBP13.06□□□□□ -0.32
PHTF1-201ENST00000357783 GNG10P50151 68 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 CCL8P80075 99 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 TMEM108Q6UXF1 575 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 SNRNP40Q96DI7 357 aaKnown RBP13.06□□□□□ -0.32
PHTF1-201ENST00000357783 P2RX4Q99571 388 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 HEYLQ9NQ87 328 aaPredicted RBP13.06□□□□□ -0.32
PHTF1-201ENST00000357783 SMCO3A2RU48 225 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 C16orf97H3BN30 126 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 RELBQ01201 579 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 ELOBQ15370 118 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 AARDQ4LEZ3 155 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 LYG1Q8N1E2 194 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 GATAD1Q8WUU5 269 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 DDB2Q92466 427 aa13.06□□□□□ -0.32
PHTF1-201ENST00000357783 FAM90A9PA6NNJ1 464 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 CXCL1P09341 107 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 IRF2P14316 349 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 TDGF1P3P51864 188 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 CD81P60033 236 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 ERVFRD-1P60508 538 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 ZCCHC24Q8N2G6 241 aaKnown RBP13.05□□□□□ -0.32
PHTF1-201ENST00000357783 OR4S2Q8NH73 311 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 ACTR3CQ9C0K3 210 aaPredicted RBP13.05□□□□□ -0.32
PHTF1-201ENST00000357783 MEF2BQ02080 365 aaPredicted RBP13.05□□□□□ -0.32
PHTF1-201ENST00000357783 NUP37Q8NFH4 326 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 RAB24Q969Q5 203 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 TCEAL7Q9BRU2 100 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 NCOR1P1Q9H4R4 102 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 RAB9BQ9NP90 201 aa13.05□□□□□ -0.32
PHTF1-201ENST00000357783 METTL1Q9UBP6 276 aaKnown RBP13.05□□□□□ -0.32
PHTF1-201ENST00000357783 TGIF2-C20orf24A0A0A6YYL0 155 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 C17orf112F2Z3M2 114 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 RRHO14718 337 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 MMP23AO75900 390 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 MDKP21741 143 aaPredicted RBP13.04□□□□□ -0.32
PHTF1-201ENST00000357783 S100PP25815 95 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 CD1BP29016 333 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 KIR2DS2P43631 304 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 ZNF674Q2M3X9 581 aa13.04□□□□□ -0.32
PHTF1-201ENST00000357783 SIRT7Q9NRC8 400 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms