RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ARL6Q9H0F7 186 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.04□□□□□ -0.64
HOXA1-202ENST00000355633 DPM3Q9P2X0 92 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 NSG2Q9Y328 171 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 WASHC3Q9Y3C0 194 aa11.04□□□□□ -0.64
HOXA1-202ENST00000355633 IGHV1-3A0A0C4DH29 117 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 A0A0D9SG52 128 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 LEUTXA8MZ59 168 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 OR9G9P0C7N8 305 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 PVALBP20472 110 aaPredicted RBP11.03□□□□□ -0.64
HOXA1-202ENST00000355633 CEACAM3P40198 252 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 RAB13P51153 203 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 OPCMLQ14982 345 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 TMUB2Q71RG4 321 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 OSR1Q8TAX0 266 aaPredicted RBP11.03□□□□□ -0.64
HOXA1-202ENST00000355633 LHX4Q969G2 390 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 RHOVQ96L33 236 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 TMEM140Q9NV12 185 aa11.03□□□□□ -0.64
HOXA1-202ENST00000355633 A0A1W2PRD5 423 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 A0A1W2PRF3 423 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 A0A1W2PRM7 423 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 MSGN1A6NI15 193 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 SHOXO15266 292 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 SSSCA1O60232 199 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 RBMXL2O75526 392 aaKnown RBP11.02□□□□□ -0.64
HOXA1-202ENST00000355633 MSMBP08118 114 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 CTRB1P17538 263 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 ARHGDIBP52566 201 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 PAX8Q06710 450 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 POU2AF1Q16633 256 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 Q5PR19 223 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 LDLRAD2Q5SZI1 272 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 TPTE2P1Q5T6R2 138 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 CTRB2Q6GPI1 263 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 KCNRGQ8N5I3 272 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 OR4C13Q8NGP0 309 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 FLYWCH2Q96CP2 140 aaKnown RBP11.02□□□□□ -0.64
HOXA1-202ENST00000355633 HARBI1Q96MB7 349 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 AQP10Q96PS8 301 aa11.02□□□□□ -0.64
HOXA1-202ENST00000355633 MED13LQ71F56 2210 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 B4DSR2 109 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 FAM90A26D6RGX4 464 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 TSPAN9O75954 239 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 P2RY1P47900 373 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 VAMP2P63027 116 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 TMEM177Q53S58 311 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 OR4A47Q6IF82 309 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 MOB3BQ86TA1 216 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 GON7Q9BXV9 100 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 C11orf1Q9H5F2 150 aa11.02□□□□□ -0.65
HOXA1-202ENST00000355633 TACC2O95359 2948 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 A0A096LNT2 108 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 IGHV3-72A0A0B4J1Y9 119 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 CHST1O43916 411 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 UBE2E1P51965 193 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 LGALS4P56470 323 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 LHFPL4Q7Z7J7 247 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 OR4A16Q8NH70 328 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 ZC4H2Q9NQZ6 224 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 HSPB7Q9UBY9 170 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 ABCA2Q9BZC7 2435 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 CELSR2Q9HCU4 2923 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 ANKRD17O75179 2603 aaKnown RBP11.01□□□□□ -0.65
HOXA1-202ENST00000355633 A0A1W2PPI3 338 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 SRRM4A7MD48 611 aaKnown RBP11.01□□□□□ -0.65
HOXA1-202ENST00000355633 SYNGR2O43760 224 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 HKR1P10072 659 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 RPL12P30050 165 aaKnown RBP11.01□□□□□ -0.65
HOXA1-202ENST00000355633 OR2B8PP59922 312 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 RPS16P62249 146 aaKnown RBP11.01□□□□□ -0.65
HOXA1-202ENST00000355633 TNFRSF9Q07011 255 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 MINOS1Q5TGZ0 78 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 RAB40CQ96S21 281 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 MS4A7Q9GZW8 240 aaPredicted RBP11.01□□□□□ -0.65
HOXA1-202ENST00000355633 HILPDAQ9Y5L2 63 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 MINOS1-NBL1R4GNA1 71 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 PTPN13Q12923 2485 aa11.01□□□□□ -0.65
HOXA1-202ENST00000355633 HELZ2Q9BYK8 2649 aaKnown RBP11□□□□□ -0.65
HOXA1-202ENST00000355633 TRAV3A0A0B4J244 114 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 KANTRA0A1W2PQU2 76 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 MED6O75586 246 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 SAA1P0DJI8 122 aaPredicted RBP11□□□□□ -0.65
HOXA1-202ENST00000355633 RELBQ01201 579 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 PRSS57Q6UWY2 283 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 OR8H3Q8N146 312 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 C1orf159Q96HA4 380 aa11□□□□□ -0.65
HOXA1-202ENST00000355633 QTRT1Q9BXR0 403 aaKnown RBP11□□□□□ -0.65
HOXA1-202ENST00000355633 TBL2Q9Y4P3 447 aaKnown RBP11□□□□□ -0.65
HOXA1-202ENST00000355633 RNF223E7ERA6 249 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 TMEM50AO95807 157 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 CAV2P51636 162 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 UBE2KP61086 200 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 LOXL1Q08397 574 aaPredicted RBP10.99□□□□□ -0.65
HOXA1-202ENST00000355633 CCDC28AQ8IWP9 274 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 OR2C3Q8N628 320 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 TRAV20A0A0B4J274 112 aa10.99□□□□□ -0.65
HOXA1-202ENST00000355633 TIMM23O14925 209 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms