RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 FAM74A4Q5TZK3 123 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 TMEM45BQ96B21 275 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 MEGF10Q96KG7 1140 aa15.38■□□□□ 0.05
COL18A1-202ENST00000355480 ELF5Q9UKW6 265 aaPredicted RBP15.38■□□□□ 0.05
COL18A1-202ENST00000355480 J3QW42 95 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 SRSF12Q8WXF0 261 aaKnown RBP15.37■□□□□ 0.05
COL18A1-202ENST00000355480 TP53RKQ96S44 253 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 NRIP2Q9BQI9 281 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 IGKV3OR2-268A0A0C4DH90 116 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 TRGV3P03979 118 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 RAB9AP51151 201 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 NPIPB3Q92617 1050 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 CHCHD2Q9Y6H1 151 aaPredicted RBP15.37■□□□□ 0.05
COL18A1-202ENST00000355480 CA2P00918 260 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF383Q8NA42 475 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 COL24A1Q17RW2 1714 aa15.37■□□□□ 0.05
COL18A1-202ENST00000355480 PIN1P1O15428 100 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 MIA3Q5JRA6 1907 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 COL4A1P02462 1669 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 EGR4Q05215 589 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF146Q15072 292 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 MAP1LC3AQ9H492 121 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 RAXQ9Y2V3 346 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 IL4P05112 153 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 DRAM1Q8N682 238 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 GPR82Q96P67 336 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 IGHV3OR16-13A0A075B7E8 117 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 IGHV3-74A0A0B4J1X5 117 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 GCGP01275 180 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 HSPB1P04792 205 aaKnown RBP15.36■□□□□ 0.05
COL18A1-202ENST00000355480 APCDD1LQ8NCL9 501 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 SSBP3Q9BWW4 388 aaPredicted RBP15.36■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF56Q15929 161 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 GP6Q9HCN6 339 aa15.36■□□□□ 0.05
COL18A1-202ENST00000355480 CECR9P0C854 216 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 DLX6P56179 175 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 HIST1H1AQ02539 215 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 LBHQ53QV2 105 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 SGK494Q96LW2 274 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 A0A0B4J293 547 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 ZNF25P17030 456 aaPredicted RBP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 KLK2P20151 261 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 C5orf66Q9H5L9 145 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 TDRD15B5MCY1 1934 aaKnown RBP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 RPL39P5Q59GN2 51 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 NEU1Q99519 415 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 LOC390937A0A1W2PQ73 354 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 M0QZK8 103 aa15.35■□□□□ 0.05
COL18A1-202ENST00000355480 GGCTO75223 188 aaKnown RBP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 EIF3GO75821 320 aaKnown RBP eCLIP15.35■□□□□ 0.05
COL18A1-202ENST00000355480 RAMP1O60894 148 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 MOSP00540 346 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 CRYBB3P26998 211 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 BSPH1Q075Z2 132 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 LINC01590Q5TEZ4 76 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 TUBA4BQ9H853 241 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 CHRNA10Q9GZZ6 450 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 TMEM238LA0A1B0GVL6 79 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 A6NJY4 79 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 IGHV3-23P01764 117 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 COX6CP09669 75 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 TAS2R60P59551 318 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 ARL6IP6Q8N6S5 226 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 HSPB9Q9BQS6 159 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 HLA-DQA1P01909 254 aa15.34■□□□□ 0.05
COL18A1-202ENST00000355480 LOC102724200A0A096LPH7 203 aaPredicted RBP15.33■□□□□ 0.05
COL18A1-202ENST00000355480 NABP2Q9BQ15 211 aa15.33■□□□□ 0.05
COL18A1-202ENST00000355480 RNASE1P07998 156 aaKnown RBP15.33■□□□□ 0.05
COL18A1-202ENST00000355480 FAM159AQ6UWV7 190 aa15.33■□□□□ 0.05
COL18A1-202ENST00000355480 FAM57AQ8TBR7 257 aa15.33■□□□□ 0.05
COL18A1-202ENST00000355480 NEU4Q8WWR8 484 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-202ENST00000355480 FAM168AQ92567 244 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 ZNF256Q9Y2P7 627 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-202ENST00000355480 CASP8AP2Q9UKL3 1982 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 NPIPB13A6NJU9 1138 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 NPIPB4C9JG80 1138 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 SMIM6P0DI80 62 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 ACP7Q6ZNF0 438 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 GOLT1AQ6ZVE7 132 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 RPS11P62280 158 aaKnown RBP eCLIP15.33■□□□□ 0.04
COL18A1-202ENST00000355480 MBNL2Q5VZF2 373 aaKnown RBP15.33■□□□□ 0.04
COL18A1-202ENST00000355480 SPSB4Q96A44 273 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 ELOVL1Q9BW60 279 aa15.33■□□□□ 0.04
COL18A1-202ENST00000355480 AKIRIN1Q9H9L7 192 aaPredicted RBP15.33■□□□□ 0.04
COL18A1-202ENST00000355480 FOXI3A8MTJ6 420 aaPredicted RBP15.32■□□□□ 0.04
COL18A1-202ENST00000355480 AMY1AP04745 511 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 KLK15Q9H2R5 256 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 MYO16Q9Y6X6 1858 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 TRGC1P0CF51 173 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 IFITM3Q01628 133 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 FAM201AQ5SY85 155 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 SMIM8Q96KF7 97 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 DPM3Q9P2X0 92 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 CD200R1LQ6Q8B3 271 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 UNQ9370/PRO34162Q6UXP9 181 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 TMEM14DPA8MWL7 114 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 TMEM262E9PQX1 116 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 ASPHD2Q6ICH7 369 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 C19orf24Q9BVV8 132 aa15.32■□□□□ 0.04
COL18A1-202ENST00000355480 COL25A1Q9BXS0 654 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms