RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 PRRT1Q99946 306 aa11.05□□□□□ -0.64
SEC13-202ENST00000350697 HAX1O00165 279 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 HLA-DRB1P01911 266 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 HNRNPCP07910 306 aaKnown RBP eCLIP11.04□□□□□ -0.64
SEC13-202ENST00000350697 PGAM2P15259 253 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 BTCP35070 178 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 ECI1P42126 302 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 PLGLAQ15195 96 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 PSG5Q15238 335 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 RBMS2Q15434 407 aaKnown RBP11.04□□□□□ -0.64
SEC13-202ENST00000350697 TMEM95Q3KNT9 176 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 SLC35E3Q7Z769 313 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 AKAP14Q86UN6 197 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 OR51S1Q8NGJ8 323 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 OR51H1Q8NH63 302 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 CD300LFQ8TDQ1 290 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 WFDC12Q8WWY7 111 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 ZNF486Q96H40 463 aaPredicted RBP11.04□□□□□ -0.64
SEC13-202ENST00000350697 ZNF747Q9BV97 191 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 FBXL15Q9H469 300 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 NUDT15Q9NV35 164 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 SLC2A8Q9NY64 477 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 METTL1Q9UBP6 276 aaKnown RBP11.04□□□□□ -0.64
SEC13-202ENST00000350697 SCP2D1Q9UJQ7 156 aa11.04□□□□□ -0.64
SEC13-202ENST00000350697 PLXNB1O43157 2135 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 RBFOX2O43251 390 aaKnown RBP eCLIP11.03□□□□□ -0.64
SEC13-202ENST00000350697 KCNAB3O43448 404 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 SLC25A17O43808 307 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 IGLV2-23P01705 113 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 RLN1P04808 185 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 H2AFB2P0C5Z0 115 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 BRWD1-AS2P59051 145 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 TATDN3Q17R31 274 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 PHLDA2Q53GA4 152 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 SPAG16Q8N0X2 631 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 KLHDC1Q8N7A1 406 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 ZFAND1Q8TCF1 268 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 SLC25A21Q9BQT8 299 aaPredicted RBP11.03□□□□□ -0.64
SEC13-202ENST00000350697 WNT10AQ9GZT5 417 aa11.03□□□□□ -0.64
SEC13-202ENST00000350697 SRRM4A7MD48 611 aaKnown RBP11.02□□□□□ -0.64
SEC13-202ENST00000350697 VSIG10L2P0DP72 767 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 RAB25P57735 213 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 RND3P61587 244 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 SURF2Q15527 256 aaPredicted RBP11.02□□□□□ -0.64
SEC13-202ENST00000350697 VMA21Q3ZAQ7 101 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 IDO2Q6ZQW0 420 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 FOXRED2Q8IWF2 684 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 TCTEX1D1Q8N7M0 179 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 MARCH1Q8TCQ1 289 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 MRGPRFQ96AM1 343 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 HSPB9Q9BQS6 159 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 C20orf85Q9H1P6 137 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 SLC2A9Q9NRM0 540 aa11.02□□□□□ -0.64
SEC13-202ENST00000350697 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 AP4M1O00189 453 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 RAMP3O60896 148 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 NDUFB6O95139 128 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 CRYGBP07316 175 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 PI3P19957 117 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 F2RP25116 425 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 UBE2KP61086 200 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 TBC1D26Q86UD7 250 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 PPP1R27Q86WC6 154 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 TEX45Q8NA69 505 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 OR13C8Q8NGS7 320 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 AIFM2Q9BRQ8 373 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 IGHV7-81A0A0B4J1V7 117 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 LINC01548A6NM66 108 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 FCN1O00602 326 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 HPRT1P00492 218 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 HRASP01112 189 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 CTSDP07339 412 aaPredicted RBP11.01□□□□□ -0.65
SEC13-202ENST00000350697 CCR6P51684 374 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 PIGPP57054 158 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 SHISA2Q6UWI4 295 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 SCGB3A2Q96PL1 93 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 NEURL2Q9BR09 285 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 OR51J1Q9H342 316 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 PLEKHA2Q9HB19 425 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 GPN1Q9HCN4 374 aaPredicted RBP11.01□□□□□ -0.65
SEC13-202ENST00000350697 TPSG1Q9NRR2 321 aa11.01□□□□□ -0.65
SEC13-202ENST00000350697 FAM212BQ9NTI7 297 aaPredicted RBP11.01□□□□□ -0.65
SEC13-202ENST00000350697 C14orf166Q9Y224 244 aaKnown RBP11.01□□□□□ -0.65
SEC13-202ENST00000350697 TNCP24821 2201 aa11□□□□□ -0.65
SEC13-202ENST00000350697 TRAV6A0A075B6T7 132 aa11□□□□□ -0.65
SEC13-202ENST00000350697 C7orf66A4D0T2 115 aa11□□□□□ -0.65
SEC13-202ENST00000350697 MPPED1O15442 326 aa11□□□□□ -0.65
SEC13-202ENST00000350697 CCNKO75909 580 aa11□□□□□ -0.65
SEC13-202ENST00000350697 CA2P00918 260 aa11□□□□□ -0.65
SEC13-202ENST00000350697 IGF1P05019 195 aa11□□□□□ -0.65
SEC13-202ENST00000350697 SAA1P0DJI8 122 aaPredicted RBP11□□□□□ -0.65
SEC13-202ENST00000350697 TAS2R31P59538 309 aa11□□□□□ -0.65
SEC13-202ENST00000350697 KRTAP10-3P60369 221 aa11□□□□□ -0.65
SEC13-202ENST00000350697 CX3CL1P78423 397 aa11□□□□□ -0.65
SEC13-202ENST00000350697 ZNF562Q6V9R5 426 aa11□□□□□ -0.65
SEC13-202ENST00000350697 CENPVQ7Z7K6 275 aaPredicted RBP11□□□□□ -0.65
SEC13-202ENST00000350697 STPG2Q8N412 459 aa11□□□□□ -0.65
SEC13-202ENST00000350697 CCDC71LQ8N9Z2 235 aa11□□□□□ -0.65
SEC13-202ENST00000350697 VSTM2AQ8TAG5 236 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms