RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 MAGT1Q9H0U3 335 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 WASHC3Q9Y3C0 194 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HILPDAQ9Y5L2 63 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 POMT1Q9Y6A1 747 aa11.93□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CR1P17927 2039 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TXNL1O43396 289 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 DEDDO75618 318 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HRASP01112 189 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CEACAM3P40198 252 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LGALS4P56470 323 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ID3Q02535 119 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TMEM65Q6PI78 240 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PDPNQ86YL7 162 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RHOVQ96L33 236 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 ZFP57Q9NU63 452 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TNFSF18Q9UNG2 199 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RCL1Q9Y2P8 373 aaKnown RBP11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 NSG2Q9Y328 171 aa11.92□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SHOXO15266 292 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR9G9P0C7N8 305 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LYL1P12980 280 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PAX6P26367 422 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MC5RP33032 325 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 UBE2E1P51965 193 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 AP2S1P53680 142 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 POLR2GP62487 172 aaKnown RBP eCLIP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 FLYWCH2Q96CP2 140 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MFFQ9GZY8 342 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TMEM140Q9NV12 185 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HIF1ANQ9NWT6 349 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 COA4Q9NYJ1 87 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 A0A1W2PPI3 338 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SRRM4A7MD48 611 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 L7N2F9 121 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RAB13P51153 203 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TMEM177Q53S58 311 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 LINC01356Q8N9X3 169 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OSR1Q8TAX0 266 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 HARBI1Q96MB7 349 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 AUP1Q9Y679 476 aa11.91□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TRAV3A0A0B4J244 114 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 TRAV20A0A0B4J274 112 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 CENPVL3A0A0U1RRI6 287 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SSSCA1O60232 199 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RBMXL2O75526 392 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 RPS16P62249 146 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 SSX2Q16385 188 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 POU2AF1Q16633 256 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MINOS1Q5TGZ0 78 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR4A47Q6IF82 309 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 OR4C13Q8NGP0 309 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 C7orf69Q9H7B7 122 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MINOS1-NBL1R4GNA1 71 aa11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 PRRC2AP48634 2157 aaKnown RBP11.9□□□□□ -0.5
CDK5RAP3-201ENST00000338399 MAP1AP78559 2803 aaPredicted RBP11.9□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RNF222A6NCQ9 220 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 WRBO00258 174 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR2B8PP59922 312 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 DYNAPQ8N1N2 210 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 INO80EQ8NBZ0 244 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR4A16Q8NH70 328 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RITA1Q96K30 269 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TET2Q6N021 2002 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.89□□□□□ -0.513e-7■■■□□ 15.6
CDK5RAP3-201ENST00000338399 IGHV3OR16-10A0A075B7F0 116 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 FAM90A9PA6NNJ1 464 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 E5RGE8 158 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TIMM23O14925 209 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CHST1O43916 411 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 RELBQ01201 579 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ACOT7LQ6ZUV0 252 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TMUB2Q71RG4 321 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 OR8H3Q8N146 312 aa11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 QTRT1Q9BXR0 403 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 MS4A7Q9GZW8 240 aaPredicted RBP11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TBL2Q9Y4P3 447 aaKnown RBP11.89□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ANKRD34BA5PLL1 514 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 MSGN1A6NI15 193 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 NPFFO15130 113 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SAA1P0DJI8 122 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 NUP62P37198 522 aaPredicted RBP11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 ARHGDIBP52566 201 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 WFDC11Q8NEX6 87 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 AIFM2Q9BRQ8 373 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 C11orf1Q9H5F2 150 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 CSMD1Q96PZ7 3565 aa11.88□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TRAV40A0A0B4J280 105 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 FAM90A26D6RGX4 464 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SYNGR2O43760 224 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TSC22D2O75157 780 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SNAPC5O75971 98 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TGFAP01135 160 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 IGHV4-31P0DP07 118 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 PVALBP20472 110 aaPredicted RBP11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 GATA3P23771 443 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 SAA4P35542 130 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 VAMP2P63027 116 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TNFRSF9Q07011 255 aa11.87□□□□□ -0.51
CDK5RAP3-201ENST00000338399 TMEM249Q2WGJ8 235 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms